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Aliases for LOC102723427 Gene

Subcategory (RNA class) for LOC102723427 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723427 Gene

  • Uncharacterized LOC102723427 3
  • Novel Transcript 5
  • AC092637.1 5

External Ids for LOC102723427 Gene

Summaries for LOC102723427 Gene

GeneCards Summary for LOC102723427 Gene

LOC102723427 (Uncharacterized LOC102723427) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723427 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723427 Gene

Genomics for LOC102723427 Gene

GeneHancer (GH) Regulatory Elements for LOC102723427 Gene

Promoters and enhancers for LOC102723427 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J068015 Enhancer 0.4 Ensembl 0.7 -4.8 -4752 1 ZNF512 SP1 RCOR1 LOC102723427 GC07P067895
GH07J068014 Enhancer 0.2 Ensembl 0.4 -5.8 -5752 0.2 LOC102723427 GC07P067895
GH07J067918 Enhancer 0.6 ENCODE 0.2 -102.1 -102050 0.8 ELF1 IKZF1 PKNOX1 GABPA ETV6 NR2C1 EHMT2 GABPB1 CREM ZBTB40 GC07P067895 LOC102723427
GH07J067950 Enhancer 0.4 Ensembl 0.2 -69.4 -69352 0.2 CEBPG CEBPB GC07P067895 LOC102723427
GH07J067917 Enhancer 0.5 Ensembl ENCODE 0.2 -103.1 -103121 1.1 ZNF143 GC07P067895 LOC102723427
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723427 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723427 Gene

Genomic Locations for LOC102723427 Gene
chr7:68,020,253-68,032,690
(GRCh38/hg38)
Size:
12,438 bases
Orientation:
Plus strand
chr7:67,485,240-67,497,677
(GRCh37/hg19)
Size:
12,438 bases
Orientation:
Plus strand

Genomic View for LOC102723427 Gene

Genes around LOC102723427 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723427 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723427 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723427 Gene

Proteins for LOC102723427 Gene

Post-translational modifications for LOC102723427 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723427 Gene

Domains & Families for LOC102723427 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723427 Gene

Function for LOC102723427 Gene

Phenotypes From GWAS Catalog for LOC102723427 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723427 Gene

Localization for LOC102723427 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723427 Gene

Pathways & Interactions for LOC102723427 Gene

PathCards logo

SuperPathways for LOC102723427 Gene

No Data Available

Interacting Proteins for LOC102723427 Gene

Gene Ontology (GO) - Biological Process for LOC102723427 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723427 Gene

Drugs & Compounds for LOC102723427 Gene

No Compound Related Data Available

Transcripts for LOC102723427 Gene

mRNA/cDNA for LOC102723427 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723427 Gene

No ASD Table

Relevant External Links for LOC102723427 Gene

GeneLoc Exon Structure for
LOC102723427

Expression for LOC102723427 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723427 Gene

Orthologs for LOC102723427 Gene

Evolution for LOC102723427 Gene

ENSEMBL:
Gene Tree for LOC102723427 (if available)
TreeFam:
Gene Tree for LOC102723427 (if available)

No data available for Orthologs for LOC102723427 Gene

Paralogs for LOC102723427 Gene

No data available for Paralogs for LOC102723427 Gene

Variants for LOC102723427 Gene

Sequence variations from dbSNP and Humsavar for LOC102723427 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000040429 -- 68,022,591(+) G/A/C intron_variant
rs1000229080 -- 68,032,277(+) C/T intron_variant
rs1000467203 -- 68,026,649(+) C/T intron_variant
rs1000625558 -- 68,030,757(+) T/G intron_variant
rs1001133660 -- 68,025,686(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102723427 Gene

Variant ID Type Subtype PubMed ID
esv2678425 CNV deletion 23128226
nsv1018102 CNV gain 25217958
nsv1146102 OTHER inversion 26484159
nsv510087 OTHER sequence alteration 20534489

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102723427 Gene

Disorders for LOC102723427 Gene

No disorders were found for LOC102723427 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723427 Gene

Publications for LOC102723427 Gene

No publications were found for LOC102723427 Gene.

No data available for External Links for LOC102723427 Gene

Products for LOC102723427 Gene

Sources for LOC102723427 Gene

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