Aliases for LOC102723409 Gene

Subcategory (RNA class) for LOC102723409 Gene

ncRNA

Aliases for LOC102723409 Gene

  • Uncharacterized LOC102723409 3

External Ids for LOC102723409 Gene

Previous GeneCards Identifiers for LOC102723409 Gene

  • GC06U902558
  • GC06M129526

Summaries for LOC102723409 Gene

GeneCards Summary for LOC102723409 Gene

LOC102723409 (Uncharacterized LOC102723409) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723409 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102723409 Gene

Genomics for LOC102723409 Gene

GeneHancer (GH) Regulatory Elements for LOC102723409 Gene

Promoters and enhancers for LOC102723409 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J129552 Enhancer 0.3 ENCODE 500.7 +0.3 266 0.2 ATF2 LOC102723409 ENSG00000226149 RF00001-287
GH06J129497 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.2 +52.5 52497 6.3 EP300 CTCF JUND FOS ZNF639 TRIM28 REST RFX1 RAD21 CTBP1 RPL5P21 ARHGAP18 RF00001-287 LOC102723409 ENSG00000226149 LAMA2
GH06J129507 Enhancer 1 Ensembl dbSUPER 0.3 +44.6 44636 2.2 RBM25 NCOR1 TRIM25 ZNF316 NFIC MYNN TRIM24 PBX2 NFE2 TAL1 RPL5P21 RF00001-287 LOC102723409 ENSG00000226149 LAMA2
GH06J129575 Enhancer 0.7 ENCODE 0.4 -22.7 -22737 0.9 CTCF POLR2G TEAD4 REST TEAD1 SMC3 ZBTB17 IRF1 RAD21 RBM22 ENSG00000226149 lnc-ARHGAP18-3 LOC102723409
GH06J129565 Enhancer 0.6 Ensembl ENCODE 0.4 -12.6 -12606 0.3 GATA2 GATA1 FOXJ2 CBFA2T3 ENSG00000233351 LOC102723409 ENSG00000226149
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723409 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723409 Gene

Genomic Locations for LOC102723409 Gene
chr6:129,502,709-129,552,937
(GRCh38/hg38)
Size:
50,229 bases
Orientation:
Minus strand

Genomic View for LOC102723409 Gene

Genes around LOC102723409 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723409 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723409 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723409 Gene

Proteins for LOC102723409 Gene

Post-translational modifications for LOC102723409 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723409 Gene

Domains & Families for LOC102723409 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102723409 Gene

Function for LOC102723409 Gene

Phenotypes From GWAS Catalog for LOC102723409 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723409 Gene

Localization for LOC102723409 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723409 Gene

Pathways & Interactions for LOC102723409 Gene

PathCards logo

SuperPathways for LOC102723409 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC102723409 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102723409 Gene

Drugs & Compounds for LOC102723409 Gene

No Compound Related Data Available

Transcripts for LOC102723409 Gene

mRNA/cDNA for LOC102723409 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723409 Gene

No ASD Table

Relevant External Links for LOC102723409 Gene

GeneLoc Exon Structure for
LOC102723409

Expression for LOC102723409 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC102723409 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC102723409

genes like me logo Genes that share expression patterns with LOC102723409: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723409 Gene

Orthologs for LOC102723409 Gene

No data available for Orthologs and Evolution for LOC102723409 Gene

Paralogs for LOC102723409 Gene

No data available for Paralogs for LOC102723409 Gene

Variants for LOC102723409 Gene

Additional dbSNP identifiers (rs#s) for LOC102723409 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723409 Gene

Disorders for LOC102723409 Gene

No disorders were found for LOC102723409 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723409 Gene

Publications for LOC102723409 Gene

  1. Genome-wide association study of periodontal health measured by probing depth in adults ages 18-49 years. (PMID: 24347629) Shaffer JR … Marazita ML (G3 (Bethesda, Md.) 2014) 3 54
  2. Genome-wide association study of height and body mass index in Australian twin families. (PMID: 20397748) Liu JZ … McRae AF (Twin research and human genetics : the official journal of the International Society for Twin Studies 2010) 3 54

No data available for Mastermind for LOC102723409 Gene

Products for LOC102723409 Gene

Sources for LOC102723409 Gene