Aliases for LOC102723340 Gene

Subcategory (RNA class) for LOC102723340 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723340 Gene

  • Uncharacterized LOC102723340 3

External Ids for LOC102723340 Gene

Previous GeneCards Identifiers for LOC102723340 Gene

  • GC12U901940

Summaries for LOC102723340 Gene

GeneCards Summary for LOC102723340 Gene

LOC102723340 (Uncharacterized LOC102723340) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC102723340 include Histidinemia.

Additional gene information for LOC102723340 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102723340 Gene

Genomics for LOC102723340 Gene

GeneHancer (GH) Regulatory Elements for LOC102723340 Gene

Promoters and enhancers for LOC102723340 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J095994 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 750.6 -0.1 -88 1.5 FOXA1 MLX RBPJ NR2F1 NR2F6 CREB1 MIXL1 MYC HLF RAD21 HAL ENSG00000257878 LOC102723340 AMDHD1 CCDC38 lnc-LTA4H-1
GH12J095998 Enhancer 0.9 ENCODE dbSUPER 0.6 +2.3 2257 0.9 ZNF24 CTCF HLF MAX ZNF121 RAD21 ZSCAN21 SMARCA4 PRDM1 RXRA NR2C1 ENSG00000257878 LOC102723340 lnc-HAL-1
GH12J096003 Promoter 0.3 EPDnew 0.4 +6.6 6603 0.1 HAL ENSG00000257878 LOC102723340 lnc-HAL-1 LTA4H
GH12J096004 Enhancer 0.3 dbSUPER 0.4 +8.6 8563 1.8 GATA3 ENSG00000257878 AMDHD1 HAL lnc-HAL-1 LOC102723340 LTA4H
GH12J096009 Enhancer 0.2 dbSUPER 0.4 +13.9 13898 2 ENSG00000257878 HAL LTA4H CFAP54 lnc-HAL-1 LOC102723340
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723340 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723340 Gene

Genomic Locations for LOC102723340 Gene
chr12:95,996,446-96,011,704
(GRCh38/hg38)
Size:
15,259 bases
Orientation:
Plus strand

Genomic View for LOC102723340 Gene

Genes around LOC102723340 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723340 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723340 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723340 Gene

Proteins for LOC102723340 Gene

Post-translational modifications for LOC102723340 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723340 Gene

Domains & Families for LOC102723340 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102723340 Gene

Function for LOC102723340 Gene

Phenotypes From GWAS Catalog for LOC102723340 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723340 Gene

Localization for LOC102723340 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723340 Gene

Pathways & Interactions for LOC102723340 Gene

PathCards logo

SuperPathways for LOC102723340 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102723340 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723340 Gene

Drugs & Compounds for LOC102723340 Gene

No Compound Related Data Available

Transcripts for LOC102723340 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723340 Gene

No ASD Table

Relevant External Links for LOC102723340 Gene

GeneLoc Exon Structure for
LOC102723340

No data available for mRNA/cDNA for LOC102723340 Gene

Expression for LOC102723340 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723340 Gene

Orthologs for LOC102723340 Gene

No data available for Orthologs and Evolution for LOC102723340 Gene

Paralogs for LOC102723340 Gene

No data available for Paralogs for LOC102723340 Gene

Variants for LOC102723340 Gene

Sequence variations from dbSNP and Humsavar for LOC102723340 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs11108369 likely-benign, Histidinemia 95,996,123(+) G/T upstream_transcript_variant
rs118085647 uncertain-significance, Histidinemia 95,996,212(+) T/A/C/G upstream_transcript_variant
rs140799551 uncertain-significance, Histidinemia 95,994,827(+) T/C upstream_transcript_variant
rs143854097 uncertain-significance, Histidinemia 95,994,812(+) G/A upstream_transcript_variant
rs150051467 uncertain-significance, Histidinemia 95,995,817(+) C/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723340 Gene

Disorders for LOC102723340 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC102723340 Gene - From: GeneCards

Disorder Aliases PubMed IDs
histidinemia
  • histidine ammonia-lyase deficiency
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC102723340: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723340 Gene

Publications for LOC102723340 Gene

No publications were found for LOC102723340 Gene.

No data available for External Links for LOC102723340 Gene

Products for LOC102723340 Gene

Sources for LOC102723340 Gene