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Aliases for LOC102723334 Gene

Subcategory (RNA class) for LOC102723334 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723334 Gene

  • Uncharacterized LOC102723334 3

External Ids for LOC102723334 Gene

Previous GeneCards Identifiers for LOC102723334 Gene

  • GC07U903739

Summaries for LOC102723334 Gene

GeneCards Summary for LOC102723334 Gene

LOC102723334 (Uncharacterized LOC102723334) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC102723334 include Cerebral Cavernous Malformations 2.

Additional gene information for LOC102723334 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723334 Gene

Genomics for LOC102723334 Gene

GeneHancer (GH) Regulatory Elements for LOC102723334 Gene

Promoters and enhancers for LOC102723334 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J044997 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.4 -419 4.5 SP1 ZFX ELF3 CBFA2T2 ZNF148 NKRF MLLT1 ZNF384 TRIM24 RELA CCM2 LOC102723334 ENSG00000260997 SNHG15 PURB MYO1G DDX56 OGDH GC07M045025
GH07J044993 Enhancer 1.2 ENCODE dbSUPER 0.7 +4.2 4245 3.4 CC2D1A ZKSCAN8 CBFA2T2 ZNF121 GTF2F1 TRIM24 EGR1 SMARCA4 MTA1 IKZF1 ENSG00000260997 POLR2J4 CCM2 SNHG15 TMED4 LOC102723334
GH07J045025 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 -28.3 -28318 4.9 ELF3 ZNF687 MLLT1 IKZF1 ZBTB33 IKZF2 CBFB EED RUNX3 ELF1 CCM2 ENSG00000260997 MYO1G ENSG00000228596 SNHG15 LINC00957 GC07M045025 LOC102723334
GH07J045008 Enhancer 0.8 Ensembl ENCODE 0.4 -6.5 -6491 6.2 ZNF121 MLLT1 IKZF1 IKZF2 RUNX3 ZBTB17 NR2F1 ATF7 ZBTB33 LARP7 ENSG00000260997 CCM2 TBRG4 SNHG15 PURB LOC102723334 GC07M045025
GH07J045020 Enhancer 0.9 ENCODE dbSUPER 0.3 -21.8 -21811 1.5 CREM IKZF1 IKZF2 TRIM22 PKNOX1 DPF2 EED RUNX3 BCL11A POLR2A CCM2 MYO1G GC07M045025 LOC102723334
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723334 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723334 Gene

Genomic Locations for LOC102723334 Gene
chr7:44,992,636-44,999,810
(GRCh38/hg38)
Size:
7,175 bases
Orientation:
Minus strand

Genomic View for LOC102723334 Gene

Genes around LOC102723334 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723334 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723334 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723334 Gene

Proteins for LOC102723334 Gene

Post-translational modifications for LOC102723334 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723334 Gene

Domains & Families for LOC102723334 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723334 Gene

Function for LOC102723334 Gene

Phenotypes From GWAS Catalog for LOC102723334 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723334 Gene

Localization for LOC102723334 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723334 Gene

Pathways & Interactions for LOC102723334 Gene

PathCards logo

SuperPathways for LOC102723334 Gene

No Data Available

Interacting Proteins for LOC102723334 Gene

Gene Ontology (GO) - Biological Process for LOC102723334 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723334 Gene

Drugs & Compounds for LOC102723334 Gene

No Compound Related Data Available

Transcripts for LOC102723334 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723334 Gene

No ASD Table

Relevant External Links for LOC102723334 Gene

GeneLoc Exon Structure for
LOC102723334

No data available for mRNA/cDNA for LOC102723334 Gene

Expression for LOC102723334 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723334 Gene

Orthologs for LOC102723334 Gene

No data available for Orthologs and Evolution for LOC102723334 Gene

Paralogs for LOC102723334 Gene

No data available for Paralogs for LOC102723334 Gene

Variants for LOC102723334 Gene

Sequence variations from dbSNP and Humsavar for LOC102723334 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs137852842 pathogenic, Cerebral cavernous malformations 2, not provided 45,000,334(-) A/G upstream_transcript_variant
rs1554353188 not-provided, Cerebral cavernous malformations 2 44,999,721(-) A/G genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs797044623 pathogenic, Cerebral cavernous malformations 2, not provided 45,000,368(-) GC/TT upstream_transcript_variant
rs1207990370 likely-benign, not specified 45,000,306(-) GCGGGCCGCG/GCGGGCCGCGCGGGCCGCG upstream_transcript_variant
rs763210611 likely-benign, not specified 45,000,369(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723334 Gene

Disorders for LOC102723334 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC102723334 Gene - From: GeneCards

Disorder Aliases PubMed IDs
cerebral cavernous malformations 2
  • cavernous angiomatous malformations
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC102723334: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723334 Gene

Publications for LOC102723334 Gene

No publications were found for LOC102723334 Gene.

No data available for External Links for LOC102723334 Gene

Products for LOC102723334 Gene

Sources for LOC102723334 Gene

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