Aliases for LOC101930421 Gene

Subcategory (RNA class) for LOC101930421 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC101930421 Gene

  • Uncharacterized LOC101930421 3

External Ids for LOC101930421 Gene

Previous GeneCards Identifiers for LOC101930421 Gene

  • GC10U901728
  • GC10P000675

Summaries for LOC101930421 Gene

GeneCards Summary for LOC101930421 Gene

LOC101930421 (Uncharacterized LOC101930421) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101930421 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101930421 Gene

Genomics for LOC101930421 Gene

GeneHancer (GH) Regulatory Elements for LOC101930421 Gene

Promoters and enhancers for LOC101930421 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J000623 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 500.7 +0.3 267 3 NRF1 USF1 TEAD4 FOS ZNF639 ZNF10 ZIC2 ZNF423 TOE1 TEAD1 LOC101930421 PRR26 DIP2C ENSG00000225140
GH10J000612 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 0.4 -10.4 -10419 4.3 ZNF217 FOS GATAD2B CTBP1 MXI1 SIN3A MYC ZNF592 MBD2 POLR2A PRR26 DIP2C TUBB8 LOC101930421 piR-49402
GH10J000620 Enhancer 0.6 ENCODE dbSUPER 0.7 -4.4 -4435 0.2 SPI1 BHLHE40 MTA2 IKZF1 IKZF2 RUNX3 PRR26 DIP2C LOC101930421 piR-49402
GH10J000624 Enhancer 0.6 ENCODE dbSUPER 0.7 -2.9 -2855 0.2 POLR2A ZNF584 ETV1 ATF3 PRR26 DIP2C LOC101930421 piR-49402
GH10J000621 Enhancer 0.5 dbSUPER 0.7 -3.4 -3405 0.8 ZFHX2 ZNF513 ZNF584 ZNF18 ETV1 EGR2 ATF3 ATF1 PRR26 DIP2C LOC101930421 piR-49402
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101930421 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101930421 Gene

Genomic Locations for LOC101930421 Gene
chr10:624,991-631,255
(GRCh38/hg38)
Size:
6,265 bases
Orientation:
Plus strand
chr10:674,578-677,195
(GRCh37/hg19)
Size:
2,618 bases
Orientation:
Plus strand

Genomic View for LOC101930421 Gene

Genes around LOC101930421 on UCSC Golden Path with GeneCards custom track

LOC101930421 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101930421 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101930421 Gene

No data available for Cytogenetic band for LOC101930421 Gene

Proteins for LOC101930421 Gene

Post-translational modifications for LOC101930421 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101930421 Gene

Domains & Families for LOC101930421 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101930421 Gene

Function for LOC101930421 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101930421 Gene

Localization for LOC101930421 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101930421 Gene

Pathways & Interactions for LOC101930421 Gene

PathCards logo

SuperPathways for LOC101930421 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101930421 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101930421 Gene

Drugs & Compounds for LOC101930421 Gene

No Compound Related Data Available

Transcripts for LOC101930421 Gene

mRNA/cDNA for LOC101930421 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101930421 Gene

No ASD Table

Relevant External Links for LOC101930421 Gene

GeneLoc Exon Structure for
LOC101930421

Expression for LOC101930421 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101930421 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101930421 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x8.5), Brain - Putamen (basal ganglia) (x6.8), Brain - Substantia nigra (x6.0), Brain - Hippocampus (x5.3), Brain - Amygdala (x5.0), and Brain - Caudate (basal ganglia) (x4.2).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101930421

genes like me logo Genes that share expression patterns with LOC101930421: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101930421 Gene

Orthologs for LOC101930421 Gene

No data available for Orthologs and Evolution for LOC101930421 Gene

Paralogs for LOC101930421 Gene

No data available for Paralogs for LOC101930421 Gene

Variants for LOC101930421 Gene

Additional dbSNP identifiers (rs#s) for LOC101930421 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101930421 Gene

Disorders for LOC101930421 Gene

No disorders were found for LOC101930421 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101930421 Gene

Publications for LOC101930421 Gene

No publications were found for LOC101930421 Gene.

No data available for Mastermind for LOC101930421 Gene

Products for LOC101930421 Gene

Sources for LOC101930421 Gene