Aliases for LOC101930370 Gene

Subcategory (RNA class) for LOC101930370 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC101930370 Gene

  • Uncharacterized LOC101930370 3
  • HSALNG0038574 167
  • NONHSAG039335 92
  • NONHSAG039334 92
  • Lnc-HMGB2-3 168

External Ids for LOC101930370 Gene

Previous GeneCards Identifiers for LOC101930370 Gene

  • GC04U901612
  • GC04M173131

Summaries for LOC101930370 Gene

GeneCards Summary for LOC101930370 Gene

LOC101930370 (Uncharacterized LOC101930370) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101930370 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101930370 Gene

Genomics for LOC101930370 Gene

GeneHancer (GH) Regulatory Elements for LOC101930370 Gene

Promoters and enhancers for LOC101930370 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J173167 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.1 51 5.2 HNRNPK CTCF SIN3A NRF1 MYC USF1 GTF2E2 PHF8 TEAD4 ZFX ENSG00000245213 GALNT7 LOC101930370
GH04J173173 Enhancer 1 ENCODE dbSUPER 0.4 -5.1 -5064 2 MYC CTBP1 OSR2 HDAC3 NFRKB ZNF316 TRIM24 CEBPG NCOR1 CEBPB ENSG00000245213 GALNT7 LOC101930370 piR-45471-472
GH04J173181 Enhancer 0.8 ENCODE dbSUPER 0.4 -12.4 -12426 2.7 JUND FOS ZIC2 OSR2 FOSL2 CEBPB ZNF707 PBX2 JUN GATA3 piR-45471-472 piR-48591-012 ENSG00000245213 GALNT7 LOC101930370
GH04J173147 Enhancer 0.7 Ensembl 0.4 +21.9 21851 0.4 CTBP1 NCOR1 MYNN FOSL1 BCOR EHMT2 NR2F1 TAL1 HDAC2 NCOA1 lnc-HMGB2-10 ENSG00000245213 lnc-GALNT7-2 LOC101930370
GH04J173119 Enhancer 0.8 Ensembl ENCODE 0.3 +48.3 48251 3.2 TAF9B TCF12 NFIC FOS NR3C1 CEBPB POLR2A SPI1 TAL1 JUND ENSG00000245213 piR-50399-023 RF00017-4455 lnc-GALNT7-3 RN7SL253P LOC101930370
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101930370 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101930370 Gene

Genomic Locations for LOC101930370 Gene
chr4:173,094,672-173,169,652
(GRCh38/hg38)
Size:
74,981 bases
Orientation:
Minus strand

Genomic View for LOC101930370 Gene

Genes around LOC101930370 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101930370 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101930370 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101930370 Gene

Proteins for LOC101930370 Gene

Post-translational modifications for LOC101930370 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101930370 Gene

Domains & Families for LOC101930370 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101930370 Gene

Function for LOC101930370 Gene

Phenotypes From GWAS Catalog for LOC101930370 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101930370 Gene

Localization for LOC101930370 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101930370 Gene

Pathways & Interactions for LOC101930370 Gene

PathCards logo

SuperPathways for LOC101930370 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101930370 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101930370 Gene

Drugs & Compounds for LOC101930370 Gene

No Compound Related Data Available

Transcripts for LOC101930370 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101930370 Gene

No ASD Table

Relevant External Links for LOC101930370 Gene

GeneLoc Exon Structure for
LOC101930370

Expression for LOC101930370 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101930370 Gene

genes like me logo Genes that share expression patterns with LOC101930370: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101930370 Gene

Orthologs for LOC101930370 Gene

No data available for Orthologs and Evolution for LOC101930370 Gene

Paralogs for LOC101930370 Gene

No data available for Paralogs for LOC101930370 Gene

Variants for LOC101930370 Gene

Additional dbSNP identifiers (rs#s) for LOC101930370 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101930370 Gene

Disorders for LOC101930370 Gene

No disorders were found for LOC101930370 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101930370 Gene

Publications for LOC101930370 Gene

  1. LOC101930370/MiR-1471 Axis Modulates the Hedgehog Signaling Pathway in Breast Cancer. (PMID: 30041193) Liu X … Zhang Y (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2018) 3 54

No data available for Mastermind for LOC101930370 Gene

Products for LOC101930370 Gene

Sources for LOC101930370 Gene