Aliases for LOC101930275 Gene

Subcategory (RNA class) for LOC101930275 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for LOC101930275 Gene

  • Uncharacterized LOC101930275 3
  • Novel Transcript 5
  • NONHSAG049643 94
  • HSALNG0063682 169
  • AC027117.1 5
  • Lnc-PCM1-4 170

External Ids for LOC101930275 Gene

Previous GeneCards Identifiers for LOC101930275 Gene

  • GC08U901794
  • GC08P017667

Summaries for LOC101930275 Gene

GeneCards Summary for LOC101930275 Gene

LOC101930275 (Uncharacterized LOC101930275) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101930275 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101930275 Gene

Genomics for LOC101930275 Gene

GeneHancer (GH) Regulatory Elements for LOC101930275 Gene

Promoters and enhancers for LOC101930275 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101930275 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101930275 Gene

Genomic Locations for LOC101930275 Gene
chr8:17,801,463-17,822,430
(GRCh38/hg38)
Size:
20,968 bases
Orientation:
Plus strand
chr8:17,666,450-17,678,377
(GRCh37/hg19)
Size:
11,928 bases
Orientation:
Plus strand

Genomic View for LOC101930275 Gene

Genes around LOC101930275 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101930275 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101930275 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101930275 Gene

Proteins for LOC101930275 Gene

Post-translational modifications for LOC101930275 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101930275 Gene

Domains & Families for LOC101930275 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101930275 Gene

Function for LOC101930275 Gene

Phenotypes From GWAS Catalog for LOC101930275 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101930275 Gene

Localization for LOC101930275 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101930275 Gene

Pathways & Interactions for LOC101930275 Gene

PathCards logo

SuperPathways for LOC101930275 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101930275 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101930275 Gene

Drugs & Compounds for LOC101930275 Gene

No Compound Related Data Available

Transcripts for LOC101930275 Gene

mRNA/cDNA for LOC101930275 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(16) RNACentral transcripts :
(14) LNCipedia transcripts :
(3) LncBook transcripts :
(5) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101930275 Gene

No ASD Table

Relevant External Links for LOC101930275 Gene

GeneLoc Exon Structure for
LOC101930275

Expression for LOC101930275 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101930275 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101930275 Gene

This gene is overexpressed in Pancreas (x5.6) and Adrenal Gland (x5.1).
genes like me logo Genes that share expression patterns with LOC101930275: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101930275 Gene

Orthologs for LOC101930275 Gene

Evolution for LOC101930275 Gene

ENSEMBL:
Gene Tree for LOC101930275 (if available)
TreeFam:
Gene Tree for LOC101930275 (if available)

No data available for Orthologs for LOC101930275 Gene

Paralogs for LOC101930275 Gene

No data available for Paralogs for LOC101930275 Gene

Variants for LOC101930275 Gene

Sequence variations from dbSNP and Humsavar for LOC101930275 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000049913 -- 17,815,330(+) G/A intron_variant
rs1000110510 -- 17,809,637(+) C/T non_coding_transcript_variant
rs1000237574 -- 17,806,640(+) T/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000310602 -- 17,818,590(+) G/C intron_variant
rs1000352713 -- 17,802,298(+) A/T genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101930275 Gene

Disorders for LOC101930275 Gene

No disorders were found for LOC101930275 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101930275 Gene

Publications for LOC101930275 Gene

No publications were found for LOC101930275 Gene.

No data available for External Links for LOC101930275 Gene

Products for LOC101930275 Gene

Sources for LOC101930275 Gene