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Aliases for LOC101929977 Gene

Subcategory (RNA class) for LOC101929977 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929977 Gene

  • Uncharacterized LOC101929977 3
  • CTD-2256P15.2 3

External Ids for LOC101929977 Gene

Previous GeneCards Identifiers for LOC101929977 Gene

  • GC05U901808

Summaries for LOC101929977 Gene

GeneCards Summary for LOC101929977 Gene

LOC101929977 (Uncharacterized LOC101929977) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929977 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929977 Gene

Genomics for LOC101929977 Gene

GeneHancer (GH) Regulatory Elements for LOC101929977 Gene

Promoters and enhancers for LOC101929977 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J010351 Promoter/Enhancer 1.6 EPDnew ENCODE 600.7 +0.2 182 4.5 MTA3 SP1 ZFX ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 NKRF POLR2A MARCH6 GC05M010353 ENSG00000259802 LOC101929977 CMBL ROPN1L-AS1 ROPN1L
GH05J010357 Enhancer 0.9 ENCODE 0.7 -3.9 -3882 0.8 CC2D1A MLLT1 ZNF384 CTCF SP7 HDGF SMARCA4 ZNF547 GMEB1 PKNOX1 CMBL ROPN1L-AS1 ROPN1L MARCH6 LOC101929977 GC05M010364
GH05J010364 Enhancer 0.7 ENCODE 0.4 -10.4 -10389 0.1 CC2D1A RAD21 PRDM10 REST CTCF ZNF316 CTBP1 MTA3 NFE2 SMARCA5 GC05P010366 GC05M010364 LOC101929977 MARCH6
GH05J010348 Enhancer 0.4 Ensembl 0.4 +5.1 5084 1.2 DPF2 ZKSCAN1 MARCH6 ENSG00000259802 GC05P010344 LOC101929977
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929977 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929977 Gene

Genomic Locations for LOC101929977 Gene
chr5:10,342,765-10,354,085
(GRCh38/hg38)
Size:
11,321 bases
Orientation:
Minus strand

Genomic View for LOC101929977 Gene

Genes around LOC101929977 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929977 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929977 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929977 Gene

Proteins for LOC101929977 Gene

Post-translational modifications for LOC101929977 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929977 Gene

Domains & Families for LOC101929977 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929977 Gene

Function for LOC101929977 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929977 Gene

Localization for LOC101929977 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929977 Gene

Pathways & Interactions for LOC101929977 Gene

PathCards logo

SuperPathways for LOC101929977 Gene

No Data Available

Interacting Proteins for LOC101929977 Gene

Gene Ontology (GO) - Biological Process for LOC101929977 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929977 Gene

Drugs & Compounds for LOC101929977 Gene

No Compound Related Data Available

Transcripts for LOC101929977 Gene

mRNA/cDNA for LOC101929977 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929977 Gene

No ASD Table

Relevant External Links for LOC101929977 Gene

GeneLoc Exon Structure for
LOC101929977

Expression for LOC101929977 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929977 Gene

Orthologs for LOC101929977 Gene

No data available for Orthologs and Evolution for LOC101929977 Gene

Paralogs for LOC101929977 Gene

No data available for Paralogs for LOC101929977 Gene

Variants for LOC101929977 Gene

Sequence variations from dbSNP and Humsavar for LOC101929977 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000262376 -- 10,352,602(-) T/C intron_variant, non_coding_transcript_variant
rs1000287501 -- 10,346,741(-) T/C intron_variant
rs1000565955 -- 10,343,926(-) G/A/C intron_variant
rs1000679567 -- 10,351,802(-) C/T intron_variant
rs1000710316 -- 10,352,088(-) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929977 Gene

Disorders for LOC101929977 Gene

No disorders were found for LOC101929977 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929977 Gene

Publications for LOC101929977 Gene

No publications were found for LOC101929977 Gene.

No data available for External Links for LOC101929977 Gene

Products for LOC101929977 Gene

Sources for LOC101929977 Gene

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