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Aliases for LOC101929964 Gene

Subcategory (RNA class) for LOC101929964 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929964 Gene

  • Uncharacterized LOC101929964 3
  • CTC-228N24.3 3

External Ids for LOC101929964 Gene

ORGUL Members for LOC101929964 Gene

Previous GeneCards Identifiers for LOC101929964 Gene

  • GC05U901744
  • GC05M127278

Summaries for LOC101929964 Gene

GeneCards Summary for LOC101929964 Gene

LOC101929964 (Uncharacterized LOC101929964) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929964 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929964 Gene

Genomics for LOC101929964 Gene

GeneHancer (GH) Regulatory Elements for LOC101929964 Gene

Promoters and enhancers for LOC101929964 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J127987 Enhancer 0.9 Ensembl ENCODE 0.4 +16.0 16016 1.8 MAFK ELF1 FOSL2 REST ZNF501 ZNF341 ZNF316 MNT JUN SP1 LOC101929964 LINC01184 ENSG00000250603 CCDC192
GH05J127957 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +44.7 44679 5.7 ELF3 NFIB SP7 PRDM1 FOSL2 POLR2A HMG20B ZIC2 ZSCAN4 ZEB2 SLC12A2 LINC01184 CCDC192 LOC101929964 ENSG00000250603
GH05J128038 Enhancer 1 Ensembl ENCODE 0.3 -34.9 -34889 2.4 CBFA2T2 TRIM24 SMARCA4 MTA1 POLR2A DPF2 LEF1 HDAC1 TCF7L2 GATAD2B SLC12A2 LOC101929964 LINC01184
GH05J127934 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.2 +68.4 68416 2.6 ZNF652 SP1 ELF3 RERE ZSCAN21 MAFK ELF1 SP7 PPARG SP5 SLC12A2 LOC101929964 ENSG00000250603 CCDC192
GH05J127997 Enhancer 0.5 Ensembl 0.4 +6.5 6511 0.8 PRDM1 MZF1 PRDM10 ZBTB12 ZNF701 ZBTB6 PRRC1 LOC101929964 LINC01184 ENSG00000250603 CCDC192
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929964 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929964 Gene

Genomic Locations for LOC101929964 Gene
chr5:128,002,346-128,004,112
(GRCh38/hg38)
Size:
1,767 bases
Orientation:
Minus strand
chr5:127,276,118-127,418,864
(GRCh37/hg19)
Size:
142,747 bases
Orientation:
Minus strand

Genomic View for LOC101929964 Gene

Genes around LOC101929964 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929964 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929964 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929964 Gene

Proteins for LOC101929964 Gene

Post-translational modifications for LOC101929964 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929964 Gene

Domains & Families for LOC101929964 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929964 Gene

Function for LOC101929964 Gene

Phenotypes From GWAS Catalog for LOC101929964 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929964 Gene

Localization for LOC101929964 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929964 Gene

Pathways & Interactions for LOC101929964 Gene

PathCards logo

SuperPathways for LOC101929964 Gene

No Data Available

Interacting Proteins for LOC101929964 Gene

Gene Ontology (GO) - Biological Process for LOC101929964 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929964 Gene

Drugs & Compounds for LOC101929964 Gene

No Compound Related Data Available

Transcripts for LOC101929964 Gene

mRNA/cDNA for LOC101929964 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929964 Gene

No ASD Table

Relevant External Links for LOC101929964 Gene

GeneLoc Exon Structure for
LOC101929964

Expression for LOC101929964 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929964 Gene

Orthologs for LOC101929964 Gene

No data available for Orthologs and Evolution for LOC101929964 Gene

Paralogs for LOC101929964 Gene

No data available for Paralogs for LOC101929964 Gene

Variants for LOC101929964 Gene

Sequence variations from dbSNP and Humsavar for LOC101929964 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000027196 -- 128,003,477(-) C/T intron_variant
rs1000309492 -- 128,003,094(-) T/C intron_variant
rs1002068380 -- 128,002,088(-) G/A downstream_transcript_variant
rs1003768508 -- 128,006,045(-) T/G upstream_transcript_variant
rs1003881264 -- 128,002,989(-) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929964 Gene

Disorders for LOC101929964 Gene

No disorders were found for LOC101929964 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929964 Gene

Publications for LOC101929964 Gene

No publications were found for LOC101929964 Gene.

No data available for External Links for LOC101929964 Gene

Products for LOC101929964 Gene

Sources for LOC101929964 Gene

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