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Aliases for LOC101929963 Gene

Subcategory (RNA class) for LOC101929963 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929963 Gene

  • Uncharacterized LOC101929963 3

External Ids for LOC101929963 Gene

Previous GeneCards Identifiers for LOC101929963 Gene

  • GC02U902748
  • GC02M177589
  • GC02M176724

Summaries for LOC101929963 Gene

GeneCards Summary for LOC101929963 Gene

LOC101929963 (Uncharacterized LOC101929963) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929963 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929963 Gene

Genomics for LOC101929963 Gene

GeneHancer (GH) Regulatory Elements for LOC101929963 Gene

Promoters and enhancers for LOC101929963 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J176763 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 -1.3 -1338 1.8 SP1 MZF1 POLR2A NFE2 RUNX3 JUNB IRF4 BATF EBF1 ETS1 LOC101929963 DNAJC19P5 PIR52992 ENSG00000230552 LINC01117
GH02J176744 Enhancer 0.8 Ensembl ENCODE 0.4 +18.4 18393 6.2 PKNOX1 ARNT NFE2 FOXA2 ZNF18 FOXA1 PRDM6 NANOG LOC101929963 LOC105369143 ENSG00000230552 LINC01117
GH02J176751 Enhancer 0.5 Ensembl 0.4 +11.1 11092 2 SP7 MZF1 PKNOX1 ZBTB17 FEZF1 ZNF843 LOC101929963 ENSG00000230552 LOC105369143 LINC01117
GH02J176729 Enhancer 0.7 ENCODE 0.3 +33.1 33145 0.2 SP1 MZF1 RXRA FOXA2 OSR2 JUND GABPA NR2F2 OVOL3 GATA3 LOC101929963 LOC105369143 ENSG00000230552 LINC01117
GH02J176755 Enhancer 0.5 Ensembl 0.4 +7.1 7093 0.8 PKNOX1 ZNF316 NFE2 MAFK LOC101929963 ENSG00000230552 LOC105369143 LINC01117
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929963 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929963 Gene

Genomic Locations for LOC101929963 Gene
chr2:176,753,400-176,763,093
(GRCh38/hg38)
Size:
9,694 bases
Orientation:
Minus strand
chr2:177,588,996-177,684,038
(GRCh37/hg19)
Size:
95,043 bases
Orientation:
Minus strand

Genomic View for LOC101929963 Gene

Genes around LOC101929963 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929963 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929963 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929963 Gene

Proteins for LOC101929963 Gene

Post-translational modifications for LOC101929963 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929963 Gene

Domains & Families for LOC101929963 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929963 Gene

Function for LOC101929963 Gene

Phenotypes From GWAS Catalog for LOC101929963 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929963 Gene

Localization for LOC101929963 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929963 Gene

Pathways & Interactions for LOC101929963 Gene

PathCards logo

SuperPathways for LOC101929963 Gene

No Data Available

Interacting Proteins for LOC101929963 Gene

Gene Ontology (GO) - Biological Process for LOC101929963 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929963 Gene

Drugs & Compounds for LOC101929963 Gene

No Compound Related Data Available

Transcripts for LOC101929963 Gene

mRNA/cDNA for LOC101929963 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929963 Gene

No ASD Table

Relevant External Links for LOC101929963 Gene

GeneLoc Exon Structure for
LOC101929963

Expression for LOC101929963 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929963 Gene

Orthologs for LOC101929963 Gene

No data available for Orthologs and Evolution for LOC101929963 Gene

Paralogs for LOC101929963 Gene

No data available for Paralogs for LOC101929963 Gene

Variants for LOC101929963 Gene

Sequence variations from dbSNP and Humsavar for LOC101929963 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000214705 -- 176,753,238(-) C/T downstream_transcript_variant
rs1000555305 -- 176,765,285(-) C/A non_coding_transcript_variant
rs1000760634 -- 176,753,081(-) G/C downstream_transcript_variant
rs1000816437 -- 176,758,868(-) A/G intron_variant
rs1000824858 -- 176,754,467(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929963 Gene

Disorders for LOC101929963 Gene

No disorders were found for LOC101929963 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929963 Gene

Publications for LOC101929963 Gene

No publications were found for LOC101929963 Gene.

No data available for External Links for LOC101929963 Gene

Products for LOC101929963 Gene

Sources for LOC101929963 Gene

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