Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC101929901 Gene

Subcategory (RNA class) for LOC101929901 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929901 Gene

  • Uncharacterized LOC101929901 3

External Ids for LOC101929901 Gene

Previous GeneCards Identifiers for LOC101929901 Gene

  • GC01U903975

Summaries for LOC101929901 Gene

GeneCards Summary for LOC101929901 Gene

LOC101929901 (Uncharacterized LOC101929901) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929901 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929901 Gene

Genomics for LOC101929901 Gene

GeneHancer (GH) Regulatory Elements for LOC101929901 Gene

Promoters and enhancers for LOC101929901 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J041380 Enhancer 1.1 ENCODE dbSUPER 600.7 -1.3 -1312 4 NFIB SP7 KLF14 GLIS2 ZBTB8A ZNF600 ZIC2 LARP7 ZEB2 ZNF639 LOC101929901 FOXO6 ENSG00000229901 GC01P041393
GH01J041379 Enhancer 0.6 dbSUPER 600.7 +1.2 1175 0.4 GLIS2 ZNF600 PRDM10 ZNF629 PATZ1 ZNF692 ZBTB48 ZFP69B ZNF335 LOC101929901 FOXO6 ENSG00000229901
GH01J041386 Enhancer 1 ENCODE dbSUPER 0.4 -6.5 -6471 2.5 SP1 ZSCAN21 SP7 PRDM1 ZNF680 GLIS2 ZBTB8A ZNF600 PRDM10 ZIC2 FOXO6 ZFP69 EDN2 ENSG00000229901 LOC101929901 GC01P041393
GH01J041391 Enhancer 0.6 Ensembl 0.4 -11.2 -11178 1.8 MAFK ZNF600 ZNF316 SCRT2 ZBTB20 SCRT1 BCOR ZNF335 EMSY GC01P041393 FOXO6 RIMKLA LOC101929901
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929901 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929901 Gene

Genomic Locations for LOC101929901 Gene
chr1:41,375,004-41,380,923
(GRCh38/hg38)
Size:
5,920 bases
Orientation:
Minus strand

Genomic View for LOC101929901 Gene

Genes around LOC101929901 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929901 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929901 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929901 Gene

Proteins for LOC101929901 Gene

Post-translational modifications for LOC101929901 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929901 Gene

Domains & Families for LOC101929901 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929901 Gene

Function for LOC101929901 Gene

Phenotypes From GWAS Catalog for LOC101929901 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929901 Gene

Localization for LOC101929901 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929901 Gene

Pathways & Interactions for LOC101929901 Gene

PathCards logo

SuperPathways for LOC101929901 Gene

No Data Available

Interacting Proteins for LOC101929901 Gene

Gene Ontology (GO) - Biological Process for LOC101929901 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929901 Gene

Drugs & Compounds for LOC101929901 Gene

No Compound Related Data Available

Transcripts for LOC101929901 Gene

mRNA/cDNA for LOC101929901 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929901 Gene

No ASD Table

Relevant External Links for LOC101929901 Gene

GeneLoc Exon Structure for
LOC101929901

Expression for LOC101929901 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929901 Gene

Orthologs for LOC101929901 Gene

No data available for Orthologs and Evolution for LOC101929901 Gene

Paralogs for LOC101929901 Gene

No data available for Paralogs for LOC101929901 Gene

Variants for LOC101929901 Gene

Sequence variations from dbSNP and Humsavar for LOC101929901 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000228298 -- 41,376,524(-) C/G upstream_transcript_variant
rs1000251067 -- 41,375,738(-) T/C upstream_transcript_variant
rs1002090543 -- 41,375,300(-) G/A intron_variant
rs1002546195 -- 41,375,626(-) G/T non_coding_transcript_variant
rs1006188782 -- 41,375,003(-) A/G downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929901 Gene

Disorders for LOC101929901 Gene

No disorders were found for LOC101929901 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929901 Gene

Publications for LOC101929901 Gene

No publications were found for LOC101929901 Gene.

No data available for External Links for LOC101929901 Gene

Products for LOC101929901 Gene

Sources for LOC101929901 Gene

Content
Loading form....