Aliases for LOC101929897 Gene

Subcategory (RNA class) for LOC101929897 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC101929897 Gene

  • Uncharacterized LOC101929897 3

External Ids for LOC101929897 Gene

Previous GeneCards Identifiers for LOC101929897 Gene

  • GC08U901686
  • GC08M042233

Summaries for LOC101929897 Gene

GeneCards Summary for LOC101929897 Gene

LOC101929897 (Uncharacterized LOC101929897) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929897 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929897 Gene

Genomics for LOC101929897 Gene

GeneHancer (GH) Regulatory Elements for LOC101929897 Gene

Promoters and enhancers for LOC101929897 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J042269 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.2 -246 3.2 HNRNPK CTCF NRF1 POLR2G USF1 SP1 PHF8 ZFX ZNF639 EP300 IKBKB ENSG00000253408 LOC101929897 POLB HGSNAT ENSG00000254165 KAT6A RF00017-7003
GH08J042268 Enhancer 0.4 ENCODE 500.7 +2.0 1999 0.7 BCL11B ZNF770 PRDM1 LOC101929897 POLB AP3M2 ENSG00000253408 RF00017-7004 RF00017-7003
GH08J042264 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.7 +4.6 4576 3.7 GTF2E2 JUND ZNF639 ZNF10 ZBTB11 RELA KLF7 EP300 CTBP1 HINFP POLB ENSG00000253408 LOC101929897 RF00017-7004 RF00017-7003
GH08J042255 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +13.3 13260 5.4 JUND FOS ZNF316 MAFF CEBPG MAFK NR2F1 JUNB CEBPB ZBTB33 POLB PLAT DKK4 piR-55650-624 RF00017-7004 ENSG00000253408 LOC101929897 RF00017-7003
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929897 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929897 Gene

Genomic Locations for LOC101929897 Gene
chr8:42,255,320-42,270,961
(GRCh38/hg38)
Size:
15,642 bases
Orientation:
Minus strand

Genomic View for LOC101929897 Gene

Genes around LOC101929897 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929897 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929897 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929897 Gene

Proteins for LOC101929897 Gene

Post-translational modifications for LOC101929897 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929897 Gene

Domains & Families for LOC101929897 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929897 Gene

Function for LOC101929897 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929897 Gene

Localization for LOC101929897 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929897 Gene

Pathways & Interactions for LOC101929897 Gene

PathCards logo

SuperPathways for LOC101929897 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101929897 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929897 Gene

Drugs & Compounds for LOC101929897 Gene

No Compound Related Data Available

Transcripts for LOC101929897 Gene

mRNA/cDNA for LOC101929897 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929897 Gene

No ASD Table

Relevant External Links for LOC101929897 Gene

GeneLoc Exon Structure for
LOC101929897

Expression for LOC101929897 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929897 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929897

genes like me logo Genes that share expression patterns with LOC101929897: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929897 Gene

Orthologs for LOC101929897 Gene

No data available for Orthologs and Evolution for LOC101929897 Gene

Paralogs for LOC101929897 Gene

No data available for Paralogs for LOC101929897 Gene

Variants for LOC101929897 Gene

Additional dbSNP identifiers (rs#s) for LOC101929897 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929897 Gene

Variant ID Type Subtype PubMed ID
esv3617006 CNV loss 21293372
nsv508508 CNV deletion 20534489
nsv831301 CNV loss 17160897
nsv971300 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929897 Gene

Disorders for LOC101929897 Gene

No disorders were found for LOC101929897 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929897 Gene

Publications for LOC101929897 Gene

No publications were found for LOC101929897 Gene.

No data available for Mastermind for LOC101929897 Gene

Products for LOC101929897 Gene

Sources for LOC101929897 Gene