Aliases for LOC101929777 Gene

Data sources for LOC101929777 Gene:

RNA type for LOC101929777 Gene

ncRNA

Aliases for LOC101929777 Gene

External Ids for LOC101929777 Gene

Previous GeneCards Identifiers for LOC101929777 Gene

  • GC17U901963

Summaries for LOC101929777 Gene

GeneCards Summary for LOC101929777 Gene

LOC101929777 (Uncharacterized LOC101929777) is an RNA Gene, and is affiliated with the ncRNA class. Among its related pathways are Presynaptic function of Kainate receptors and Signaling by GPCR.

Additional gene information for LOC101929777 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929777 Gene

Genomics for LOC101929777 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929777 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J046833 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 +0.6 598 1.6 ZNF600 ATF2 ZIC2 BHLHE40 ZFP64 FOXA2 SAP130 CREM ZBTB48 ZNF2 LOC101929777 WNT3 WNT9B lnc-WNT3-1 lnc-RPRML-5 NSF LRRC37A2
GH17J046834 Enhancer 0.3 ENCODE 250.7 -0.7 -657 0.2 BHLHE40 LOC101929777 WNT3 WNT9B lnc-WNT3-1 GOSR2 HSALNG0116957 LRRC37A2
GH17J046818 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE 0.4 +13.8 13834 2 EZH2 MYC NCOR1 IKZF1 ZNF592 SMAD5 ETS1 BHLHE40 TBP SIN3A WNT3 KANSL1 ENSG00000262372 ARL17A EFCAB13 MRPL45P2 ARL17B RPS2P47 KPNB1 WNT9B
GH17J046824 Enhancer 0.7 ENCODE 0.4 +10.6 10553 0.2 IKZF1 MYC CTCF REST ZNF592 SMC3 YY1 ZKSCAN1 RAD21 SKIL lnc-RPRML-5 WNT3 lnc-WNT3-1 LOC101929777 NSF LRRC37A2
GH17J046823 Enhancer 0.5 ENCODE 0.4 +11.1 11148 0.5 IKZF1 ZIC2 CTCF EGR1 ZSCAN29 REST ZNF652 L3MBTL2 WNT3 lnc-RPRML-5 lnc-WNT3-1 LOC101929777 NSF LRRC37A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929777 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929777 Gene

Latest Assembly
chr17:46,830,595-46,833,033
(GRCh38/hg38)
Size:
2,439 bases
Orientation:
Minus strand

Alternative Locations (GRCh38/hg38)

  • chr17(ALT_REF_LOCI_1):1,816,322-1,818,760 (-)
  • chr17(ALT_REF_LOCI_2):1,350,323-1,352,456 (-)

Genomic View for LOC101929777 Gene

Genes around LOC101929777 on UCSC Golden Path with GeneCards custom track
LOC101929777 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101929777 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929777 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929777 Gene

Proteins for LOC101929777 Gene

Post-translational modifications for LOC101929777 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929777 Gene

Domains & Families for LOC101929777 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929777 Gene

Function for LOC101929777 Gene

Phenotypes for LOC101929777 Gene

genes like me logo Genes that share phenotypes with LOC101929777: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929777 Gene

Localization for LOC101929777 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929777 Gene

Pathways & Interactions for LOC101929777 Gene

genes like me logo Genes that share pathways with LOC101929777: view

Gene Ontology (GO) - Biological Process for LOC101929777 Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for LOC101929777 Gene

Drugs & Compounds for LOC101929777 Gene

No Compound Related Data Available

Transcripts for LOC101929777 Gene

LOC101929777 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929777 Gene

No ASD Table

Relevant External Links for LOC101929777 Gene

GeneLoc Exon Structure for
LOC101929777

No data available for mRNA/cDNA for LOC101929777 Gene

Expression for LOC101929777 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929777

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929777 Gene

Orthologs for LOC101929777 Gene

No data available for Orthologs and Evolution for LOC101929777 Gene

Paralogs for LOC101929777 Gene

No data available for Paralogs for LOC101929777 Gene

Variants for LOC101929777 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101929777 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929777 Gene

Disorders for LOC101929777 Gene

No disorders were found for LOC101929777 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929777 Gene

Publications for LOC101929777 Gene

No publications were found for LOC101929777 Gene.

No data available for Mastermind for LOC101929777 Gene

Products for LOC101929777 Gene

Sources for LOC101929777 Gene