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Aliases for LOC101929762 Gene

Subcategory (RNA class) for LOC101929762 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101929762 Gene

  • Uncharacterized LOC101929762 3
  • AC092656.1 5

External Ids for LOC101929762 Gene

Previous GeneCards Identifiers for LOC101929762 Gene

  • GC04U901595
  • GC04M120113

Summaries for LOC101929762 Gene

GeneCards Summary for LOC101929762 Gene

LOC101929762 (Uncharacterized LOC101929762) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929762 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929762 Gene

Genomics for LOC101929762 Gene

GeneHancer (GH) Regulatory Elements for LOC101929762 Gene

Promoters and enhancers for LOC101929762 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I119206 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.6 1632 8.1 HDGF PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 USP53 LOC101929762 LOC645513 FABP2 METTL14 LOC729218 KLHL2P1 MRPL42P1
GH04I119237 Enhancer 0.8 ENCODE 12.6 -25.5 -25462 0.7 MEIS2 JUN BACH1 FEZF1 BATF IRF4 ZNF335 ZNF316 ZBTB48 NFATC1 LOC645513 LOC101929762 USP53 MYOZ2 PIR34278 GC04P119302
GH04I119046 Enhancer 0.6 Ensembl ENCODE dbSUPER 11.5 +166.1 166143 0.2 LOC101929762 USP53 ENSG00000280551 GC04M119070 SYNPO2
GH04I119123 Enhancer 0.5 dbSUPER 11.4 +88.9 88898 1.4 MEIS2 GATA3 ZSCAN16 ZBTB40 USP53 FABP2 LOC101929762 LOC105377395 GC04P119115 LOC102723967
GH04I119047 Enhancer 0.4 ENCODE dbSUPER 11.5 +165.4 165403 0.2 LOC101929762 USP53 ENSG00000280551 GC04M119070 SYNPO2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101929762 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929762 Gene

Genomic Locations for LOC101929762 Gene
chr4:119,192,773-119,212,644
(GRCh38/hg38)
Size:
19,872 bases
Orientation:
Minus strand
chr4:120,113,928-120,133,799
(GRCh37/hg19)

Genomic View for LOC101929762 Gene

Genes around LOC101929762 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929762 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929762 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929762 Gene

Proteins for LOC101929762 Gene

Post-translational modifications for LOC101929762 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929762 Gene

Domains & Families for LOC101929762 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929762 Gene

Function for LOC101929762 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929762 Gene

Localization for LOC101929762 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929762 Gene

Pathways & Interactions for LOC101929762 Gene

SuperPathways for LOC101929762 Gene

No Data Available

Interacting Proteins for LOC101929762 Gene

Gene Ontology (GO) - Biological Process for LOC101929762 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929762 Gene

Drugs & Compounds for LOC101929762 Gene

No Compound Related Data Available

Transcripts for LOC101929762 Gene

mRNA/cDNA for LOC101929762 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929762 Gene

No ASD Table

Relevant External Links for LOC101929762 Gene

GeneLoc Exon Structure for
LOC101929762

Expression for LOC101929762 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929762 Gene

genes like me logo Genes that share expression patterns with LOC101929762: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929762 Gene

Orthologs for LOC101929762 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LOC101929762 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 34
  • 99 (a)
OneToOne
Species where no ortholog for LOC101929762 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for LOC101929762 Gene

ENSEMBL:
Gene Tree for LOC101929762 (if available)
TreeFam:
Gene Tree for LOC101929762 (if available)

Paralogs for LOC101929762 Gene

No data available for Paralogs for LOC101929762 Gene

Variants for LOC101929762 Gene

Sequence variations from dbSNP and Humsavar for LOC101929762 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000079645 -- 119,192,401(-) T/C downstream_transcript_variant
rs1000178932 -- 119,198,901(-) C/ intron_variant
rs1000510098 -- 119,197,866(-) G/A intron_variant
rs10006304 -- 119,203,150(-) A/G intron_variant
rs1000662855 -- 119,197,961(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929762 Gene

Disorders for LOC101929762 Gene

Additional Disease Information for LOC101929762

No disorders were found for LOC101929762 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929762 Gene

Publications for LOC101929762 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC101929762 Gene

Sources for LOC101929762 Gene

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