Aliases for LOC101929748 Gene

Subcategory (RNA class) for LOC101929748 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for LOC101929748 Gene

  • Uncharacterized LOC101929748 3
  • Lnc-ZNF484-64 165

External Ids for LOC101929748 Gene

Previous GeneCards Identifiers for LOC101929748 Gene

  • GC09U901840

Summaries for LOC101929748 Gene

GeneCards Summary for LOC101929748 Gene

LOC101929748 (Uncharacterized LOC101929748) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929748 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929748 Gene

Genomics for LOC101929748 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929748 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J092810 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 -1.1 -1113 2 RNF2 ZNF692 LARP7 POLR2A PATZ1 CTCF ZNF501 EZH2 ELF4 ZNF600 ANKRD19P ENSG00000288062 ENSG00000288271 LOC101929748 piR-55577-002 NOL8 MTND4P15 CENPP RF00017-7714 BICD2
GH09J092801 Enhancer 0.4 Ensembl 0.4 +7.5 7487 0.4 ZNF701 SPI1 IKZF2 MLLT1 NOL8 MTND4P15 SPTLC1 MTCO3P29 ECM2 LOC101929748 lnc-FGD3-1 RF00017-7714 BICD2 ZNF484
GH09J092797 Enhancer 0.3 Ensembl 0.4 +11.8 11786 0.2 NFIL3 RFX1 BICD2 CENPP lnc-FGD3-1 RF00017-7714 LOC101929748 ZNF484
GH09J092793 Enhancer 0.2 Ensembl 0.4 +13.7 13686 0.8 lnc-FGD3-1 BICD2 FGD3 RF00017-7714 LOC101929748 ZNF484
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929748 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929748 Gene

Genomic Locations for LOC101929748 Gene
chr9:92,805,385-92,808,087
(GRCh38/hg38)
Size:
2,703 bases
Orientation:
Minus strand

Genomic View for LOC101929748 Gene

Genes around LOC101929748 on UCSC Golden Path with GeneCards custom track
LOC101929748 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101929748 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929748 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929748 Gene

Proteins for LOC101929748 Gene

Post-translational modifications for LOC101929748 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929748 Gene

Domains & Families for LOC101929748 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929748 Gene

Function for LOC101929748 Gene

Phenotypes From GWAS Catalog for LOC101929748 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929748 Gene

Localization for LOC101929748 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929748 Gene

Pathways & Interactions for LOC101929748 Gene

PathCards logo

SuperPathways for LOC101929748 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929748 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929748 Gene

Drugs & Compounds for LOC101929748 Gene

No Compound Related Data Available

Transcripts for LOC101929748 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101929748 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A76AD6_9606 lncRNA 2703 2

RefSeq: NR_136301,

LNCipedia: lnc-ZNF484-64:1,

LOC101929748 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101929748 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929748 Gene

No ASD Table

Relevant External Links for LOC101929748 Gene

GeneLoc Exon Structure for
LOC101929748

Expression for LOC101929748 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929748 Gene

Orthologs for LOC101929748 Gene

No data available for Orthologs and Evolution for LOC101929748 Gene

Paralogs for LOC101929748 Gene

No data available for Paralogs for LOC101929748 Gene

Variants for LOC101929748 Gene

Additional dbSNP identifiers (rs#s) for LOC101929748 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929748 Gene

Disorders for LOC101929748 Gene

No disorders were found for LOC101929748 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929748 Gene

Publications for LOC101929748 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC101929748 Gene

Products for LOC101929748 Gene

Sources for LOC101929748 Gene