Aliases for LOC101929653 Gene

Data sources for LOC101929653 Gene:

Subcategory (RNA class) for LOC101929653 Gene


Aliases for LOC101929653 Gene

External Ids for LOC101929653 Gene

Previous GeneCards Identifiers for LOC101929653 Gene

  • GC11U902094
  • GC11M131502

Summaries for LOC101929653 Gene

GeneCards Summary for LOC101929653 Gene

LOC101929653 (Uncharacterized LOC101929653) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929653 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929653 Gene

Genomics for LOC101929653 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929653 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J130915 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 11.9 +624.6 624601 2.3 TBP NR2C1 SMAD5 ETS1 MBD2 ZNF217 POLR2A CTCF BHLHE40 ELF1 SNX19 HSALNG0088255 piR-44546-001 NTM-AS1 LOC101929653 ZBTB44 PRDM10 ADAMTS15
GH11J131504 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 11.2 +36.2 36247 1.2 CTCF RAD21 YY1 SMC3 lnc-ADAMTS15-10 lnc-SNX19-8 LOC101929653 NTM
GH11J131466 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 10.6 +75.1 75114 1.3 SIN3A CTCF YY1 RAD21 ZNF143 HSALNG0088286 LOC101929653 lnc-ADAMTS15-10 NTM
GH11J131659 Enhancer 0.6 Ensembl dbSUPER 9.5 -118.1 -118133 0.8 SPI1 RUNX3 EZH2 LOC101929653 NTM-AS1 HSALNG0088290 NTM
GH11J131511 Enhancer 0.5 ENCODE 11 +28.9 28886 0.2 CTCF SMC3 RAD21 ZNF143 YY1 LOC101929653 lnc-SNX19-8 NTM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929653 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929653 Gene

Latest Assembly
38,134 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
7,011 bases
Minus strand

(GRCh37/hg19 by Ensembl)
38,109 bases
Minus strand

Genomic View for LOC101929653 Gene

Genes around LOC101929653 on UCSC Golden Path with GeneCards custom track
LOC101929653 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101929653 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929653 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929653 Gene

Proteins for LOC101929653 Gene

Post-translational modifications for LOC101929653 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929653 Gene

Domains & Families for LOC101929653 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929653 Gene

Function for LOC101929653 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929653 Gene

Localization for LOC101929653 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929653 Gene

Pathways & Interactions for LOC101929653 Gene

PathCards logo

SuperPathways for LOC101929653 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929653 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929653 Gene

Drugs & Compounds for LOC101929653 Gene

No Compound Related Data Available

Transcripts for LOC101929653 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101929653 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000079A2A_9606 lncRNA 4343 5

RefSeq: NR_110140,

Ensembl: ENST00000414466 (view in UCSC) ,

LncBook: HSALNT0183627,

LNCipedia: lnc-SNX19-9:1,


URS00001DEC6B_9606 lncRNA 539 3

Ensembl: ENST00000414856 (view in UCSC) ,

LNCipedia: lnc-SNX19-9:5,


URS0000EEC021_9606 lncRNA 660 1

Ensembl: ENST00000443319 (view in UCSC) ,

URS00008BA893_9606 lncRNA 737 3

LncBook: HSALNT0183637,

LNCipedia: lnc-SNX19-9:3,


URS00008B8EB4_9606 lncRNA 638 3

LncBook: HSALNT0183623,

LNCipedia: lnc-SNX19-9:2,


LOC101929653 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101929653 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929653 Gene

No ASD Table

Relevant External Links for LOC101929653 Gene

GeneLoc Exon Structure for

Expression for LOC101929653 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929653 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929653

genes like me logo Genes that share expression patterns with LOC101929653: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929653 Gene

Orthologs for LOC101929653 Gene

Evolution for LOC101929653 Gene

Gene Tree for LOC101929653 (if available)
Gene Tree for LOC101929653 (if available)

No data available for Orthologs for LOC101929653 Gene

Paralogs for LOC101929653 Gene

No data available for Paralogs for LOC101929653 Gene

Variants for LOC101929653 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101929653 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC101929653 Gene

Variant ID Type Subtype PubMed ID
esv275372 CNV gain+loss 21479260

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929653 Gene

Disorders for LOC101929653 Gene

Additional Disease Information for LOC101929653

Open Targets Platform
Open Targets Platform

No disorders were found for LOC101929653 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929653 Gene

Publications for LOC101929653 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC101929653 Gene

Products for LOC101929653 Gene

Sources for LOC101929653 Gene