Aliases for LOC101929633 Gene

Subcategory (RNA class) for LOC101929633 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC101929633 Gene

  • Uncharacterized LOC101929633 3
  • HSALNG0020122 167
  • NONHSAG029708 92
  • Lnc-SCN2A-12 168

External Ids for LOC101929633 Gene

Previous GeneCards Identifiers for LOC101929633 Gene

  • GC02U902716

Summaries for LOC101929633 Gene

GeneCards Summary for LOC101929633 Gene

LOC101929633 (Uncharacterized LOC101929633) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929633 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929633 Gene

Genomics for LOC101929633 Gene

GeneHancer (GH) Regulatory Elements for LOC101929633 Gene

Promoters and enhancers for LOC101929633 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929633 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929633 Gene

Genomic Locations for LOC101929633 Gene
chr2:164,840,580-164,924,407
(GRCh38/hg38)
Size:
83,828 bases
Orientation:
Plus strand

Genomic View for LOC101929633 Gene

Genes around LOC101929633 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929633 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929633 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929633 Gene

Proteins for LOC101929633 Gene

Post-translational modifications for LOC101929633 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929633 Gene

Domains & Families for LOC101929633 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929633 Gene

Function for LOC101929633 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929633 Gene

Localization for LOC101929633 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929633 Gene

Pathways & Interactions for LOC101929633 Gene

PathCards logo

SuperPathways for LOC101929633 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101929633 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929633 Gene

Drugs & Compounds for LOC101929633 Gene

No Compound Related Data Available

Transcripts for LOC101929633 Gene

mRNA/cDNA for LOC101929633 Gene

9 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 NONCODE transcripts :
3 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929633 Gene

No ASD Table

Relevant External Links for LOC101929633 Gene

GeneLoc Exon Structure for
LOC101929633

Expression for LOC101929633 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929633 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929633

genes like me logo Genes that share expression patterns with LOC101929633: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929633 Gene

Orthologs for LOC101929633 Gene

No data available for Orthologs and Evolution for LOC101929633 Gene

Paralogs for LOC101929633 Gene

No data available for Paralogs for LOC101929633 Gene

Variants for LOC101929633 Gene

Additional dbSNP identifiers (rs#s) for LOC101929633 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929633 Gene

Variant ID Type Subtype PubMed ID
dgv163e55 CNV gain 17911159
dgv4099n100 CNV gain 25217958
esv2642304 CNV deletion 19546169
esv2762947 CNV gain 21179565
esv3593223 CNV gain 21293372

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929633 Gene

Disorders for LOC101929633 Gene

No disorders were found for LOC101929633 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929633 Gene

Publications for LOC101929633 Gene

  1. A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl's gyrus. (PMID: 25130324) Cai DC … Hagoort P (Genes, brain, and behavior 2014) 3 54
  2. Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. (PMID: 21347282) Lettre G … Boerwinkle E (PLoS genetics 2011) 3 54
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

No data available for Mastermind for LOC101929633 Gene

Products for LOC101929633 Gene

Sources for LOC101929633 Gene