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Aliases for LOC101929592 Gene

Subcategory (RNA class) for LOC101929592 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929592 Gene

  • Uncharacterized LOC101929592 3
  • Novel Transcript 5
  • AL451062.1 5

External Ids for LOC101929592 Gene

Previous GeneCards Identifiers for LOC101929592 Gene

  • GC01U903751

Summaries for LOC101929592 Gene

GeneCards Summary for LOC101929592 Gene

LOC101929592 (Uncharacterized LOC101929592) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929592 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929592 Gene

Genomics for LOC101929592 Gene

GeneHancer (GH) Regulatory Elements for LOC101929592 Gene

Promoters and enhancers for LOC101929592 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J043726 Enhancer 0.2 Ensembl 600.7 +0.6 642 0.2 LOC101929592 GC01M043702 ENSG00000283414 ST3GAL3 ENSG00000284989
GH01J043539 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 19.2 +179.9 179859 15.4 ZNF652 SP1 CTCF ELF3 MNT ZNF148 CEBPG RERE CSDE1 TFE3 GC01M043545 LOC101929592 PTPRF MED8 YBX1 SZT2 ST3GAL3 KDM4A-AS1 IPO13 ENSG00000237950
GH01J043830 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 10.5 -106.8 -106764 6.3 ZFX CC2D1A ZKSCAN8 CBFA2T2 ZNF148 NKRF MLLT1 ZNF121 GTF2F1 ZNF687 GC01M043833 ARTN ENSG00000237950 HYI ST3GAL3 IPO13 LOC101929592 SZT2 DMAP1 ATP6V0B
GH01J043799 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE 17.4 -73.2 -73216 2.1 RUNX3 FOS LOC101929592 ST3GAL3 KDM4A-AS1 ATP6V0B ARTN KDM4A ARMH1 CDC20 MED8 SZT2
GH01J043912 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.8 -187.2 -187158 5 PRDM1 ZNF600 PRDM10 ZIC2 ZNF316 CEBPB NFE2 ZBTB17 ZNF335 ZNF16 ST3GAL3 ARTN LOC101929592 SZT2 CCDC24 B4GALT2 ENSG00000225721 SLC6A9 GC01M043857 ENSG00000284989
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929592 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929592 Gene

Genomic Locations for LOC101929592 Gene
chr1:43,709,392-43,727,343
(GRCh38/hg38)
Size:
17,952 bases
Orientation:
Minus strand
chr1:44,175,063-44,193,014
(GRCh37/hg19)
Size:
17,952 bases
Orientation:
Minus strand

Genomic View for LOC101929592 Gene

Genes around LOC101929592 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929592 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929592 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929592 Gene

Proteins for LOC101929592 Gene

Post-translational modifications for LOC101929592 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929592 Gene

Domains & Families for LOC101929592 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929592 Gene

Function for LOC101929592 Gene

Phenotypes From GWAS Catalog for LOC101929592 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929592 Gene

Localization for LOC101929592 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929592 Gene

Pathways & Interactions for LOC101929592 Gene

PathCards logo

SuperPathways for LOC101929592 Gene

No Data Available

Interacting Proteins for LOC101929592 Gene

Gene Ontology (GO) - Biological Process for LOC101929592 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929592 Gene

Drugs & Compounds for LOC101929592 Gene

No Compound Related Data Available

Transcripts for LOC101929592 Gene

mRNA/cDNA for LOC101929592 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929592 Gene

No ASD Table

Relevant External Links for LOC101929592 Gene

GeneLoc Exon Structure for
LOC101929592

Expression for LOC101929592 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929592 Gene

Orthologs for LOC101929592 Gene

Evolution for LOC101929592 Gene

ENSEMBL:
Gene Tree for LOC101929592 (if available)
TreeFam:
Gene Tree for LOC101929592 (if available)

No data available for Orthologs for LOC101929592 Gene

Paralogs for LOC101929592 Gene

No data available for Paralogs for LOC101929592 Gene

Variants for LOC101929592 Gene

Sequence variations from dbSNP and Humsavar for LOC101929592 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000308246 -- 43,710,426(-) G/C intron_variant
rs1000353436 -- 43,710,191(-) C/T intron_variant
rs1000635831 -- 43,709,002(-) A/G downstream_transcript_variant
rs1000842180 -- 43,715,538(-) T/C intron_variant
rs1001002985 -- 43,718,547(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929592 Gene

Disorders for LOC101929592 Gene

No disorders were found for LOC101929592 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929592 Gene

Publications for LOC101929592 Gene

No publications were found for LOC101929592 Gene.

No data available for External Links for LOC101929592 Gene

Products for LOC101929592 Gene

Sources for LOC101929592 Gene

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