Aliases for LOC101929578 Gene

Aliases for LOC101929578 Gene

  • Transcription Factor CP2-Like 3

External Ids for LOC101929578 Gene

Previous GeneCards Identifiers for LOC101929578 Gene

  • GC17U901824

Summaries for LOC101929578 Gene

GeneCards Summary for LOC101929578 Gene

LOC101929578 (Transcription Factor CP2-Like) is a Pseudogene.

Additional gene information for LOC101929578 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929578 Gene

Genomics for LOC101929578 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J039237 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 +0.2 156 2.7 HNRNPL CREB1 PRDM10 ZNF629 ZIC2 ZSCAN4 PATZ1 ZNF600 ZNF341 SMARCC1 ENSG00000265460 LOC101929578 lnc-RPL19-6 RPL19 CACNB1 PGAP3 THRA STAC2 FBXL20
GH17J039235 Enhancer 0.8 ENCODE 600.7 -1.9 -1947 0.2 CTCF PRDM10 ZNF629 ZNF692 PRDM1 MTA2 ZNF143 ZSCAN4 ZNF24 REST LOC101929578 lnc-RPL19-6 STAC2 FBXL20
GH17J039236 Enhancer 0.7 ENCODE 600.7 -1.5 -1543 0.3 CTCF ZNF629 ZNF692 MTA2 ZSCAN4 ZNF24 REST ZNF501 TRIM22 ZNF639 LOC101929578 lnc-RPL19-6 STAC2 FBXL20
GH17J039239 Enhancer 0.7 ENCODE 0.7 +2.0 2003 0.2 CTCF FOXA1 ZNF143 RAD21 POLR2A TRIM22 ZNF600 ZNF561 CTBP1 TCF12 ENSG00000265460 lnc-RPL19-6 RPL19 CACNB1 LOC101929578 STAC2 lnc-FBXL20-1 FBXL20
GH17J039231 Enhancer 1 ENCODE CraniofacialAtlas 0.4 -6.2 -6202 1.6 CTCF PRDM10 ZNF629 RFX1 ZNF143 ZIC2 PATZ1 REST RAD21 IKZF2 ENSG00000214546 MLLT6 STAC2 LOC101929578 FBXL20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929578 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929578 Gene

Genomic Locations for LOC101929578 Gene
chr17:39,237,770-39,245,804
(GRCh38/hg38)
Size:
8,035 bases
Orientation:
Plus strand

Genomic View for LOC101929578 Gene

Genes around LOC101929578 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929578 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929578 Gene

Proteins for LOC101929578 Gene

Post-translational modifications for LOC101929578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929578 Gene

Domains & Families for LOC101929578 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929578 Gene

Function for LOC101929578 Gene

Phenotypes From GWAS Catalog for LOC101929578 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929578 Gene

Localization for LOC101929578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929578 Gene

Pathways & Interactions for LOC101929578 Gene

PathCards logo

SuperPathways for LOC101929578 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929578 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929578 Gene

Drugs & Compounds for LOC101929578 Gene

No Compound Related Data Available

Transcripts for LOC101929578 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929578 Gene

No ASD Table

Relevant External Links for LOC101929578 Gene

GeneLoc Exon Structure for
LOC101929578

No data available for mRNA/cDNA for LOC101929578 Gene

Expression for LOC101929578 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929578 Gene

genes like me logo Genes that share expression patterns with LOC101929578: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929578 Gene

Orthologs for LOC101929578 Gene

No data available for Orthologs and Evolution for LOC101929578 Gene

Paralogs for LOC101929578 Gene

No data available for Paralogs for LOC101929578 Gene

Variants for LOC101929578 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929578 Gene

Disorders for LOC101929578 Gene

No disorders were found for LOC101929578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929578 Gene

Publications for LOC101929578 Gene

No publications were found for LOC101929578 Gene.

No data available for Mastermind for LOC101929578 Gene

Products for LOC101929578 Gene

Sources for LOC101929578 Gene