Aliases for LOC101929574 Gene

Subcategory (RNA class) for LOC101929574 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC101929574 Gene

  • Uncharacterized LOC101929574 3
  • Novel Transcript 5
  • HSALNG0079218 167
  • NONHSAG006371 92
  • Lnc-DYDC1-1 168
  • AC021028.1 5

External Ids for LOC101929574 Gene

Previous GeneCards Identifiers for LOC101929574 Gene

  • GC10U901644
  • GC10M080528

Summaries for LOC101929574 Gene

GeneCards Summary for LOC101929574 Gene

LOC101929574 (Uncharacterized LOC101929574) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929574 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929574 Gene

Genomics for LOC101929574 Gene

GeneHancer (GH) Regulatory Elements for LOC101929574 Gene

Promoters and enhancers for LOC101929574 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J080535 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 521.2 -0.1 -101 1.4 ZBTB40 ZNF217 CTCF PHF8 ZFX POLR2A ZBTB11 REST MYC CTBP1 LOC101929574 SH2D4B piR-41394-005 piR-31162-042 piR-56759-060 piR-49732-045 TSPAN14
GH10J080537 Enhancer 0.7 ENCODE dbSUPER 500.7 -1.4 -1448 0.2 NCOR1 TAL1 TCF12 RCOR1 GATA2 CBFA2T2 CBFA2T3 IKZF1 LOC101929574 SH2D4B piR-56759-060
GH10J080538 Enhancer 0.3 ENCODE dbSUPER 500.7 -1.1 -1088 0.2 LOC101929574 SH2D4B piR-56759-060 piR-49732-045
GH10J080452 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 9.6 +71.8 71767 22.9 HNRNPK ZNF217 CTCF ZSCAN5C NRF1 POLR2G JUND PHF8 FOS ZFX TSPAN14 PRXL2A ENSG00000272489 LOC101929574 DYDC1 DYDC2 ANXA11 PLAC9 MBL1P SH2D4B
GH10J080492 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 6.9 +35.7 35681 15 EP300 ZNF217 CTCF TCF12 POLR2G JUND FOS PHB2 ZFX ZIC2 TSPAN14 NUTM2B-AS1 ENSG00000272489 PRXL2A DYDC1 DYDC2 LOC101929574 ANXA11 piR-48877 RF00017-717
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929574 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929574 Gene

Genomic Locations for LOC101929574 Gene
chr10:80,519,577-80,536,012
(GRCh38/hg38)
Size:
16,436 bases
Orientation:
Minus strand
chr10:82,289,353-82,295,698
(GRCh37/hg19)
Size:
6,346 bases
Orientation:
Minus strand

Genomic View for LOC101929574 Gene

Genes around LOC101929574 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929574 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929574 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929574 Gene

Proteins for LOC101929574 Gene

Post-translational modifications for LOC101929574 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929574 Gene

Domains & Families for LOC101929574 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929574 Gene

Function for LOC101929574 Gene

Phenotypes From GWAS Catalog for LOC101929574 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929574 Gene

Localization for LOC101929574 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929574 Gene

Pathways & Interactions for LOC101929574 Gene

PathCards logo

SuperPathways for LOC101929574 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101929574 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929574 Gene

Drugs & Compounds for LOC101929574 Gene

No Compound Related Data Available

Transcripts for LOC101929574 Gene

mRNA/cDNA for LOC101929574 Gene

9 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
5 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929574 Gene

No ASD Table

Relevant External Links for LOC101929574 Gene

GeneLoc Exon Structure for
LOC101929574

Expression for LOC101929574 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929574 Gene

genes like me logo Genes that share expression patterns with LOC101929574: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929574 Gene

Orthologs for LOC101929574 Gene

Evolution for LOC101929574 Gene

ENSEMBL:
Gene Tree for LOC101929574 (if available)
TreeFam:
Gene Tree for LOC101929574 (if available)

No data available for Orthologs for LOC101929574 Gene

Paralogs for LOC101929574 Gene

No data available for Paralogs for LOC101929574 Gene

Variants for LOC101929574 Gene

Additional dbSNP identifiers (rs#s) for LOC101929574 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929574 Gene

Variant ID Type Subtype PubMed ID
nsv1141879 OTHER inversion 24896259
nsv469837 CNV loss 16826518
nsv470967 CNV loss 18288195
nsv7354 CNV deletion 18451855
nsv831924 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929574 Gene

Disorders for LOC101929574 Gene

No disorders were found for LOC101929574 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929574 Gene

Publications for LOC101929574 Gene

No publications were found for LOC101929574 Gene.

No data available for Mastermind for LOC101929574 Gene

Products for LOC101929574 Gene

Sources for LOC101929574 Gene