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Aliases for LOC101929566 Gene

Subcategory (RNA class) for LOC101929566 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929566 Gene

  • Uncharacterized LOC101929566 3
  • LA16c-325D7.2 3

External Ids for LOC101929566 Gene

Previous GeneCards Identifiers for LOC101929566 Gene

  • GC16U901600

Summaries for LOC101929566 Gene

GeneCards Summary for LOC101929566 Gene

LOC101929566 (Uncharacterized LOC101929566) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929566 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929566 Gene

Genomics for LOC101929566 Gene

GeneHancer (GH) Regulatory Elements for LOC101929566 Gene

Promoters and enhancers for LOC101929566 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J002867 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 600.7 -0.2 -209 2.1 SP1 ZFX CC2D1A ELF3 CTCF ZKSCAN8 MNT ZNF148 NKRF POLR2A ENSG00000263280 LOC101929566 GC16P003913 FLYWCH2 ZG16B FLYWCH1 PRSS41 SNORA3C PRSS33 ELOB
GH16J002869 Enhancer 0.8 ENCODE 600.7 -1.4 -1419 0.2 ELF3 CEBPG PPARG KAT8 CEBPA GATAD2A RXRB GABPA IRF2 KMT2B LOC101929566 GC16P003913 FLYWCH2
GH16J002874 Enhancer 0.9 ENCODE 0.4 -6.8 -6809 0.2 CTCF ELF3 ZNF384 ZSCAN21 MAFK POLR2A PRDM1 RAD21 KAT8 RXRA ZNF597 TBL3 PRSS30P LOC101929566 FLYWCH2
GH16J002872 Enhancer 0.5 Ensembl 0.7 -4.8 -4765 1.2 PRDM1 ZIC2 PATZ1 OSR2 KLF17 ZNF24 GLIS1 PRSS22 FLYWCH2 LOC101929566
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929566 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929566 Gene

Genomic Locations for LOC101929566 Gene
chr16:2,865,837-2,868,236
(GRCh38/hg38)
Size:
2,400 bases
Orientation:
Minus strand
chr16:2,916,349-2,917,619
(GRCh37/hg19)
Size:
1,271 bases
Orientation:
Minus strand

Genomic View for LOC101929566 Gene

Genes around LOC101929566 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929566 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929566 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929566 Gene

Proteins for LOC101929566 Gene

Post-translational modifications for LOC101929566 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929566 Gene

Domains & Families for LOC101929566 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929566 Gene

Function for LOC101929566 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929566 Gene

Localization for LOC101929566 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929566 Gene

Pathways & Interactions for LOC101929566 Gene

PathCards logo

SuperPathways for LOC101929566 Gene

No Data Available

Interacting Proteins for LOC101929566 Gene

Gene Ontology (GO) - Biological Process for LOC101929566 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929566 Gene

Drugs & Compounds for LOC101929566 Gene

No Compound Related Data Available

Transcripts for LOC101929566 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929566 Gene

No ASD Table

Relevant External Links for LOC101929566 Gene

GeneLoc Exon Structure for
LOC101929566

No data available for mRNA/cDNA for LOC101929566 Gene

Expression for LOC101929566 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929566 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929566 Gene

This gene is overexpressed in Testis (x6.9).
genes like me logo Genes that share expression patterns with LOC101929566: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929566 Gene

Orthologs for LOC101929566 Gene

No data available for Orthologs and Evolution for LOC101929566 Gene

Paralogs for LOC101929566 Gene

No data available for Paralogs for LOC101929566 Gene

Variants for LOC101929566 Gene

Sequence variations from dbSNP and Humsavar for LOC101929566 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1001466251 -- 2,868,764(-) T/G non_coding_transcript_variant
rs1001585019 -- 2,868,472(-) G/A non_coding_transcript_variant
rs1001869839 -- 2,869,376(-) T/C upstream_transcript_variant
rs1001936239 -- 2,868,309(-) G/A non_coding_transcript_variant
rs1002590613 -- 2,866,205(-) G/A/C downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929566 Gene

Disorders for LOC101929566 Gene

No disorders were found for LOC101929566 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929566 Gene

Publications for LOC101929566 Gene

No publications were found for LOC101929566 Gene.

No data available for External Links for LOC101929566 Gene

Products for LOC101929566 Gene

Sources for LOC101929566 Gene

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