Aliases for LOC101929563 Gene

Subcategory (RNA class) for LOC101929563 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC101929563 Gene

  • Uncharacterized LOC101929563 3

External Ids for LOC101929563 Gene

Previous GeneCards Identifiers for LOC101929563 Gene

  • GC09U901888

Summaries for LOC101929563 Gene

GeneCards Summary for LOC101929563 Gene

LOC101929563 (Uncharacterized LOC101929563) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929563 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929563 Gene

Genomics for LOC101929563 Gene

GeneHancer (GH) Regulatory Elements for LOC101929563 Gene

Promoters and enhancers for LOC101929563 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J023659 Enhancer 0.4 Ensembl ENCODE 0.4 +12.7 12668 1.3 ATF2 NOP56P2 ENSG00000283982 LOC101929563 RF00876-029
GH09J023663 Enhancer 0.3 Ensembl ENCODE 0.4 +8.7 8656 1.4 ENSG00000283982 LOC101929563 RF00876-029
GH09J023598 Enhancer 0.6 Ensembl 0.2 +73.3 73321 1 ZNF217 CUX1 CTBP1 NEUROD1 JUND ELF1 GATA3 FOXA1 DPF2 MAFK SUMO2P2 lnc-DMRTA1-26 piR-60985-126 ENSG00000283982 LOC101929563
GH09J023622 Enhancer 0.5 Ensembl 0.2 +50.5 50499 3 FOS POLR2A IKZF1 GATA2 SMARCA4 JUN EGR2 lnc-DMRTA1-26 SUMO2P2 ENSG00000283982 LOC101929563 piR-60985-126
GH09J023611 Enhancer 0.5 Ensembl ENCODE 0.2 +60.5 60498 1.8 FOS GATA2 lnc-DMRTA1-26 SUMO2P2 piR-60985-126 ENSG00000283982 LOC101929563
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929563 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929563 Gene

Genomic Locations for LOC101929563 Gene
chr9:23,500,691-23,672,399
(GRCh38/hg38)
Size:
171,709 bases
Orientation:
Minus strand

Genomic View for LOC101929563 Gene

Genes around LOC101929563 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929563 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929563 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929563 Gene

Proteins for LOC101929563 Gene

Post-translational modifications for LOC101929563 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929563 Gene

Domains & Families for LOC101929563 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929563 Gene

Function for LOC101929563 Gene

Phenotypes From GWAS Catalog for LOC101929563 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929563 Gene

Localization for LOC101929563 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929563 Gene

Pathways & Interactions for LOC101929563 Gene

PathCards logo

SuperPathways for LOC101929563 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101929563 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929563 Gene

Drugs & Compounds for LOC101929563 Gene

No Compound Related Data Available

Transcripts for LOC101929563 Gene

mRNA/cDNA for LOC101929563 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929563 Gene

No ASD Table

Relevant External Links for LOC101929563 Gene

GeneLoc Exon Structure for
LOC101929563

Expression for LOC101929563 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929563 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929563

genes like me logo Genes that share expression patterns with LOC101929563: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929563 Gene

Orthologs for LOC101929563 Gene

No data available for Orthologs and Evolution for LOC101929563 Gene

Paralogs for LOC101929563 Gene

No data available for Paralogs for LOC101929563 Gene

Variants for LOC101929563 Gene

Additional dbSNP identifiers (rs#s) for LOC101929563 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929563 Gene

Variant ID Type Subtype PubMed ID
nsv1137431 CNV deletion 24896259
nsv524265 CNV loss 19592680
nsv613824 CNV loss 21841781
nsv6505 CNV deletion 18451855

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929563 Gene

Disorders for LOC101929563 Gene

No disorders were found for LOC101929563 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929563 Gene

Publications for LOC101929563 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 54

No data available for Mastermind for LOC101929563 Gene

Products for LOC101929563 Gene

Sources for LOC101929563 Gene