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Aliases for LOC101929560 Gene

Subcategory (RNA class) for LOC101929560 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101929560 Gene

  • Uncharacterized LOC101929560 3
  • AC016705.2 5

External Ids for LOC101929560 Gene

Previous GeneCards Identifiers for LOC101929560 Gene

  • GC15U901625

Summaries for LOC101929560 Gene

GeneCards Summary for LOC101929560 Gene

LOC101929560 (Uncharacterized LOC101929560) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929560 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929560 Gene

Genomics for LOC101929560 Gene

GeneHancer (GH) Regulatory Elements for LOC101929560 Gene

Promoters and enhancers for LOC101929560 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I080403 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 550.8 -0.9 -922 1.7 SIN3A ZNF76 ZNF335 GLIS2 SCRT2 EGR2 ZBTB11 ZNF398 REST ZNF217 ARNT2 LOC101929560 GC15P080370 ENSG00000258010
GH15I080405 Enhancer 0.8 FANTOM5 dbSUPER 550.8 -1.9 -1921 0.2 USF1 ZBTB48 ZNF341 SCRT2 ZIC2 ARNT2 LOC101929560 ENSG00000258010
GH15I079964 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 6.5 +435.3 435252 7.5 HDGF PKNOX1 FOXA2 SMAD1 SIN3A IRF4 ZNF207 ZNF143 ATF7 FOS BCL2A1 MTHFS ST20-MTHFS ST20 RNU6-667P LOC101929560 ZFAND6 GC15P079945
GH15I079680 Enhancer 0.7 Ensembl ENCODE 5 +721.7 721700 3.1 JUND ZNF189 IKZF1 FOSL2 FOS ELF1 LOC101929560 HNRNPCP3 LOC390618 ENSG00000260674
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101929560 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929560 Gene

Genomic Locations for LOC101929560 Gene
chr15:80,344,853-80,403,575
(GRCh38/hg38)
Size:
58,723 bases
Orientation:
Minus strand

Genomic View for LOC101929560 Gene

Genes around LOC101929560 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929560 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929560 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929560 Gene

Proteins for LOC101929560 Gene

Post-translational modifications for LOC101929560 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929560 Gene

Domains & Families for LOC101929560 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929560 Gene

Function for LOC101929560 Gene

Phenotypes From GWAS Catalog for LOC101929560 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929560 Gene

Localization for LOC101929560 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929560 Gene

Pathways & Interactions for LOC101929560 Gene

SuperPathways for LOC101929560 Gene

No Data Available

Interacting Proteins for LOC101929560 Gene

Gene Ontology (GO) - Biological Process for LOC101929560 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929560 Gene

Drugs & Compounds for LOC101929560 Gene

No Compound Related Data Available

Transcripts for LOC101929560 Gene

mRNA/cDNA for LOC101929560 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929560 Gene

No ASD Table

Relevant External Links for LOC101929560 Gene

GeneLoc Exon Structure for
LOC101929560

Expression for LOC101929560 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929560 Gene

genes like me logo Genes that share expression patterns with LOC101929560: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929560 Gene

Orthologs for LOC101929560 Gene

Evolution for LOC101929560 Gene

ENSEMBL:
Gene Tree for LOC101929560 (if available)
TreeFam:
Gene Tree for LOC101929560 (if available)

No data available for Orthologs for LOC101929560 Gene

Paralogs for LOC101929560 Gene

No data available for Paralogs for LOC101929560 Gene

Variants for LOC101929560 Gene

Sequence variations from dbSNP and Humsavar for LOC101929560 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000033556 -- 80,356,828(-) T/C intron_variant
rs1000508842 -- 80,356,594(-) G/A intron_variant
rs1000869522 -- 80,345,541(-) A/G intron_variant
rs1000911935 -- 80,361,888(-) C/T intron_variant
rs1000963599 -- 80,362,071(-) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929560 Gene

Disorders for LOC101929560 Gene

No disorders were found for LOC101929560 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929560 Gene

Publications for LOC101929560 Gene

  1. Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder. (PMID: 18711365) Ferreira MA … Wellcome Trust Case Control Consortium (Nature genetics 2008) 3 58

Products for LOC101929560 Gene

Sources for LOC101929560 Gene

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