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Aliases for LOC101929555 Gene

Subcategory (RNA class) for LOC101929555 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC101929555 Gene

  • Uncharacterized LOC101929555 3

External Ids for LOC101929555 Gene

Previous GeneCards Identifiers for LOC101929555 Gene

  • GC06U902391

Summaries for LOC101929555 Gene

GeneCards Summary for LOC101929555 Gene

LOC101929555 (Uncharacterized LOC101929555) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929555 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929555 Gene

Genomics for LOC101929555 Gene

GeneHancer (GH) Regulatory Elements for LOC101929555 Gene

Promoters and enhancers for LOC101929555 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I041021 Enhancer 1.1 Ensembl ENCODE 550.8 +0.8 834 1.3 NFIB INSM2 FEZF1 ZNF2 RAD21 ZNF335 ZNF213 ZNF366 ZSCAN5C FOS LOC101929555 APOBEC2 MED20 BYSL GC06P042401
GH06I041026 Enhancer 1.2 Ensembl ENCODE 0.8 -4.5 -4535 3.6 HDGF ARID4B SIN3A DMAP1 ZNF2 ZNF143 KLF13 SP3 MXD4 REST APOBEC2 UNC5CL LOC101929555
GH06I041036 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE 0.4 -15.6 -15616 5.7 PKNOX1 FOXA2 ARID4B DMAP1 ZNF48 YY1 ZNF143 FOS ZNF263 RXRA UNC5CL APOBEC2 TSPO2 LOC101929555 OARD1
GH06I040995 Enhancer 1.2 Ensembl ENCODE 0.3 +25.3 25325 5.3 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 SLC30A9 ZNF416 ZNF143 FOS REST TSPO2 UNC5CL NFYA LOC101929555 GC06P042401
GH06I041006 Enhancer 0.7 ENCODE 0.4 +16.9 16943 0.2 ELF3 CTCF ZNF384 YBX1 ZNF2 THRB RAD21 ZNF324 ZNF121 SMC3 LOC101929555 GC06P042401
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101929555 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929555 Gene

Genomic Locations for LOC101929555 Gene
chr6:40,878,886-41,023,280
(GRCh38/hg38)
Size:
144,395 bases
Orientation:
Minus strand

Genomic View for LOC101929555 Gene

Genes around LOC101929555 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929555 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929555 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929555 Gene

Proteins for LOC101929555 Gene

Post-translational modifications for LOC101929555 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929555 Gene

Domains & Families for LOC101929555 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929555 Gene

Function for LOC101929555 Gene

Phenotypes From GWAS Catalog for LOC101929555 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929555 Gene

Localization for LOC101929555 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929555 Gene

Pathways & Interactions for LOC101929555 Gene

SuperPathways for LOC101929555 Gene

No Data Available

Interacting Proteins for LOC101929555 Gene

Gene Ontology (GO) - Biological Process for LOC101929555 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929555 Gene

Drugs & Compounds for LOC101929555 Gene

No Compound Related Data Available

Transcripts for LOC101929555 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929555 Gene

No ASD Table

Relevant External Links for LOC101929555 Gene

GeneLoc Exon Structure for
LOC101929555

No data available for mRNA/cDNA for LOC101929555 Gene

Expression for LOC101929555 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929555 Gene

Orthologs for LOC101929555 Gene

No data available for Orthologs and Evolution for LOC101929555 Gene

Paralogs for LOC101929555 Gene

No data available for Paralogs for LOC101929555 Gene

Variants for LOC101929555 Gene

Sequence variations from dbSNP and Humsavar for LOC101929555 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000022817 -- 40,999,663(-) G/A intron_variant
rs1000036054 -- 40,904,473(-) A/G intron_variant
rs1000059192 -- 40,943,721(-) T/C intron_variant
rs1000064269 -- 41,007,055(-) A/T intron_variant
rs1000070952 -- 40,982,971(-) G/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101929555 Gene

Variant ID Type Subtype PubMed ID
nsv5275 CNV deletion 18451855
nsv349443 CNV insertion 16902084
esv3608785 CNV loss 21293372
esv3608783 CNV loss 21293372
esv3608782 CNV loss 21293372
esv3358574 CNV duplication 20981092
esv2522496 CNV insertion 19546169

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101929555 Gene

Disorders for LOC101929555 Gene

Additional Disease Information for LOC101929555

No disorders were found for LOC101929555 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929555 Gene

Publications for LOC101929555 Gene

No publications were found for LOC101929555 Gene.

Products for LOC101929555 Gene

Sources for LOC101929555 Gene

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