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Aliases for LOC101929549 Gene

Subcategory (RNA class) for LOC101929549 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101929549 Gene

  • Uncharacterized LOC101929549 3
  • AC005833.1 5

External Ids for LOC101929549 Gene

Previous GeneCards Identifiers for LOC101929549 Gene

  • GC12U901846

Summaries for LOC101929549 Gene

GeneCards Summary for LOC101929549 Gene

LOC101929549 (Uncharacterized LOC101929549) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929549 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929549 Gene

Genomics for LOC101929549 Gene

GeneHancer (GH) Regulatory Elements for LOC101929549 Gene

Promoters and enhancers for LOC101929549 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I004719 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 550.8 -0.2 -216 2.1 POU5F1 SIN3A GALNT8 LOC101929549 DYRK4 ENSG00000255639
GH12I004647 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.8 +71.1 71050 2.4 PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 POLR2B ZNF207 AKAP3 GC12P005656 NDUFA9 LOC103568124 GALNT8 LOC101929549 DYRK4 LOC100420673 ENSG00000256381 ENSG00000272921
GH12I004857 Enhancer 0.9 Ensembl ENCODE 9.8 -137.8 -137821 0.6 CTCF RB1 SIN3A EBF1 IRF4 RAD21 ZNF335 GLIS2 ZNF366 ZBTB48 KCNA1 GALNT8 LOC101929549 GC12P005660 ENSG00000255608
GH12I004858 Enhancer 0.8 ENCODE 9.8 -138.5 -138508 0.2 GTF2F1 CTCF TFAP4 PKNOX1 ESRRA MAX SIN3A ZIC2 RARA TEAD3 KCNA1 GALNT8 LOC101929549 GC12P005660 ENSG00000255608
GH12I004855 Enhancer 0.6 ENCODE 9.8 -135.5 -135538 0.2 CTCF ZNF654 TRIM22 REST IRF4 RAD21 SCRT2 ZNF341 ZNF143 SMC3 KCNA1 GALNT8 LOC101929549 GC12P005660 ENSG00000255608
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101929549 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929549 Gene

Genomic Locations for LOC101929549 Gene
chr12:4,700,417-4,720,102
(GRCh38/hg38)
Size:
19,686 bases
Orientation:
Minus strand
chr12:4,809,583-4,829,268
(GRCh37/hg19)

Genomic View for LOC101929549 Gene

Genes around LOC101929549 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929549 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929549 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929549 Gene

Proteins for LOC101929549 Gene

Post-translational modifications for LOC101929549 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929549 Gene

Domains & Families for LOC101929549 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929549 Gene

Function for LOC101929549 Gene

Phenotypes From GWAS Catalog for LOC101929549 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929549 Gene

Localization for LOC101929549 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929549 Gene

Pathways & Interactions for LOC101929549 Gene

SuperPathways for LOC101929549 Gene

No Data Available

Interacting Proteins for LOC101929549 Gene

Gene Ontology (GO) - Biological Process for LOC101929549 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929549 Gene

Drugs & Compounds for LOC101929549 Gene

No Compound Related Data Available

Transcripts for LOC101929549 Gene

mRNA/cDNA for LOC101929549 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929549 Gene

No ASD Table

Relevant External Links for LOC101929549 Gene

GeneLoc Exon Structure for
LOC101929549

Expression for LOC101929549 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929549 Gene

genes like me logo Genes that share expression patterns with LOC101929549: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929549 Gene

Orthologs for LOC101929549 Gene

Evolution for LOC101929549 Gene

ENSEMBL:
Gene Tree for LOC101929549 (if available)
TreeFam:
Gene Tree for LOC101929549 (if available)

No data available for Orthologs for LOC101929549 Gene

Paralogs for LOC101929549 Gene

No data available for Paralogs for LOC101929549 Gene

Variants for LOC101929549 Gene

Sequence variations from dbSNP and Humsavar for LOC101929549 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000325650 -- 4,717,386(-) C/A intron_variant
rs1000412743 -- 4,710,864(-) G/C intron_variant
rs1000487955 -- 4,711,066(-) A/G intron_variant
rs1000895492 -- 4,703,602(-) G/A intron_variant
rs1000963393 -- 4,706,686(-) A/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101929549 Gene

Variant ID Type Subtype PubMed ID
nsv832318 CNV gain 17160897
nsv589 CNV insertion 18451855
nsv525579 CNV gain 19592680
nsv483060 CNV loss 15286789
nsv1054218 CNV loss 25217958
nsv1040098 CNV gain 25217958
esv3333580 CNV insertion 20981092
esv2745451 CNV deletion 23290073
esv2745450 CNV deletion 23290073
esv2743409 CNV deletion 23290073

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101929549 Gene

Disorders for LOC101929549 Gene

Additional Disease Information for LOC101929549

No disorders were found for LOC101929549 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929549 Gene

Publications for LOC101929549 Gene

No publications were found for LOC101929549 Gene.

Products for LOC101929549 Gene

Sources for LOC101929549 Gene

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