Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC101929528 Gene

Subcategory (RNA class) for LOC101929528 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929528 Gene

  • Uncharacterized LOC101929528 3

External Ids for LOC101929528 Gene

Previous GeneCards Identifiers for LOC101929528 Gene

  • GC08U901698
  • GC08M059169

Summaries for LOC101929528 Gene

GeneCards Summary for LOC101929528 Gene

LOC101929528 (Uncharacterized LOC101929528) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929528 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929528 Gene

Genomics for LOC101929528 Gene

GeneHancer (GH) Regulatory Elements for LOC101929528 Gene

Promoters and enhancers for LOC101929528 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J058271 Enhancer 0.3 Ensembl 600.7 -0.2 -200 1 MYC LOC101929528 ENSG00000253281 GC08P058299
GH08J058254 Enhancer 1.2 VISTA Ensembl ENCODE 0.4 +15.8 15846 4.1 ZNF687 SP7 MLLT1 IKZF1 IKZF2 CBFB RUNX3 NBN BATF ATF7 FAM110B UBXN2B ENSG00000253281 LOC101929528 GC08M057799
GH08J058269 Enhancer 0.4 Ensembl 0.7 +2.5 2500 1.2 FOXA1 ZBTB7B LOC101929528 ENSG00000253281 GC08M057799
GH08J058233 Enhancer 0.8 Ensembl ENCODE 0.3 +37.0 37026 3.1 POLR2A CTBP1 FOXA2 ZNF217 DPF2 NFIB GATA3 CTCF RAD21 FOXA1 FAM110B LOC101929528 GC08M057799
GH08J058218 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.2 +53.9 53900 1.2 ATF7 CEBPB EP300 ATF2 FOS SDCBP ENSG00000253376 LOC101929528 GC08M057799
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929528 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929528 Gene

Genomic Locations for LOC101929528 Gene
chr8:58,255,771-58,272,101
(GRCh38/hg38)
Size:
16,331 bases
Orientation:
Minus strand
chr8:59,168,330-59,184,678
(GRCh37/hg19)
Size:
16,349 bases
Orientation:
Minus strand

Genomic View for LOC101929528 Gene

Genes around LOC101929528 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929528 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929528 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929528 Gene

Proteins for LOC101929528 Gene

Post-translational modifications for LOC101929528 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929528 Gene

Domains & Families for LOC101929528 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929528 Gene

Function for LOC101929528 Gene

Phenotypes From GWAS Catalog for LOC101929528 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929528 Gene

Localization for LOC101929528 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929528 Gene

Pathways & Interactions for LOC101929528 Gene

PathCards logo

SuperPathways for LOC101929528 Gene

No Data Available

Interacting Proteins for LOC101929528 Gene

Gene Ontology (GO) - Biological Process for LOC101929528 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929528 Gene

Drugs & Compounds for LOC101929528 Gene

No Compound Related Data Available

Transcripts for LOC101929528 Gene

mRNA/cDNA for LOC101929528 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929528 Gene

No ASD Table

Relevant External Links for LOC101929528 Gene

GeneLoc Exon Structure for
LOC101929528

Expression for LOC101929528 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929528 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929528 Gene

This gene is overexpressed in Testis (x52.0).
genes like me logo Genes that share expression patterns with LOC101929528: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929528 Gene

Orthologs for LOC101929528 Gene

No data available for Orthologs and Evolution for LOC101929528 Gene

Paralogs for LOC101929528 Gene

No data available for Paralogs for LOC101929528 Gene

Variants for LOC101929528 Gene

Sequence variations from dbSNP and Humsavar for LOC101929528 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000066116 -- 58,269,553(-) G/A/C intron_variant
rs1000066752 -- 58,259,881(-) C/A non_coding_transcript_variant
rs1000101024 -- 58,258,174(-) A/G intron_variant
rs1000315527 -- 58,271,086(-) G/A/T intron_variant
rs1000370174 -- 58,257,556(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929528 Gene

Disorders for LOC101929528 Gene

No disorders were found for LOC101929528 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929528 Gene

Publications for LOC101929528 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

No data available for External Links for LOC101929528 Gene

Products for LOC101929528 Gene

Sources for LOC101929528 Gene

Content
Loading form....