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Aliases for LOC101929526 Gene

Subcategory (RNA class) for LOC101929526 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929526 Gene

  • Uncharacterized LOC101929526 3
  • Novel Transcript 5
  • AL121900.1 5

External Ids for LOC101929526 Gene

Previous GeneCards Identifiers for LOC101929526 Gene

  • GC20U900762

Summaries for LOC101929526 Gene

GeneCards Summary for LOC101929526 Gene

LOC101929526 (Uncharacterized LOC101929526) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929526 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929526 Gene

Genomics for LOC101929526 Gene

GeneHancer (GH) Regulatory Elements for LOC101929526 Gene

Promoters and enhancers for LOC101929526 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J018699 Enhancer 0.4 Ensembl ENCODE 600.7 -0.6 -640 0.5 LOC101929526 DTD1 EEF1A1P34 ENSG00000284776
GH20J018698 Enhancer 0.2 Ensembl 600.7 +0.2 208 0.2 LOC101929526 DUXAP7 DTD1 ENSG00000284776
GH20J018704 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.4 -6.9 -6867 3.1 POLR2A JUND SMIM26 DTD1 LOC101929526 EEF1A1P34 ENSG00000284776
GH20J018713 Enhancer 0.7 Ensembl ENCODE 0.4 -13.8 -13792 1.8 ZNF217 CTCF MAZ ZNF143 GLIS1 SEC23B DTD1 SMIM26 LOC101929526 EEF1A1P34 ENSG00000284776
GH20J018728 Enhancer 0.8 Ensembl ENCODE 0.3 -29.8 -29792 3 MAFK RELA IKZF1 IKZF2 SCRT2 DPF2 RUNX3 ELF1 NR2F1 SMARCA5 SEC23B SMIM26 DTD1 DZANK1 LOC101929526 EEF1A1P34 ENSG00000284776
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929526 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929526 Gene

Genomic Locations for LOC101929526 Gene
chr20:18,674,395-18,698,709
(GRCh38/hg38)
Size:
24,315 bases
Orientation:
Minus strand
chr20:18,655,039-18,679,353
(GRCh37/hg19)
Size:
24,315 bases
Orientation:
Minus strand

Genomic View for LOC101929526 Gene

Genes around LOC101929526 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929526 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929526 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929526 Gene

Proteins for LOC101929526 Gene

Post-translational modifications for LOC101929526 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929526 Gene

Domains & Families for LOC101929526 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929526 Gene

Function for LOC101929526 Gene

Phenotypes From GWAS Catalog for LOC101929526 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929526 Gene

Localization for LOC101929526 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929526 Gene

Pathways & Interactions for LOC101929526 Gene

PathCards logo

SuperPathways for LOC101929526 Gene

No Data Available

Interacting Proteins for LOC101929526 Gene

Gene Ontology (GO) - Biological Process for LOC101929526 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929526 Gene

Drugs & Compounds for LOC101929526 Gene

No Compound Related Data Available

Transcripts for LOC101929526 Gene

mRNA/cDNA for LOC101929526 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929526 Gene

No ASD Table

Relevant External Links for LOC101929526 Gene

GeneLoc Exon Structure for
LOC101929526

Expression for LOC101929526 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929526 Gene

Orthologs for LOC101929526 Gene

Evolution for LOC101929526 Gene

ENSEMBL:
Gene Tree for LOC101929526 (if available)
TreeFam:
Gene Tree for LOC101929526 (if available)

No data available for Orthologs for LOC101929526 Gene

Paralogs for LOC101929526 Gene

No data available for Paralogs for LOC101929526 Gene

Variants for LOC101929526 Gene

Sequence variations from dbSNP and Humsavar for LOC101929526 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1000122722 -- 18,681,017(-) C/A intron_variant
rs1000207453 -- 18,698,147(-) G/A/T intron_variant
rs1000525611 -- 18,695,070(-) G/A intron_variant
rs1000531255 -- 18,699,788(-) G/T upstream_transcript_variant
rs1000575275 -- 18,695,067(-) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101929526 Gene

Variant ID Type Subtype PubMed ID
esv1401622 CNV insertion 17803354
esv1476050 CNV insertion 17803354
esv2468883 CNV insertion 19546169
nsv1142306 CNV tandem duplication 24896259
nsv954259 CNV insertion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101929526 Gene

Disorders for LOC101929526 Gene

No disorders were found for LOC101929526 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929526 Gene

Publications for LOC101929526 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

No data available for External Links for LOC101929526 Gene

Products for LOC101929526 Gene

Sources for LOC101929526 Gene

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