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Aliases for LOC101929523 Gene

Subcategory (RNA class) for LOC101929523 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929523 Gene

  • Uncharacterized LOC101929523 3

External Ids for LOC101929523 Gene

Previous GeneCards Identifiers for LOC101929523 Gene

  • GC06U902462

Summaries for LOC101929523 Gene

GeneCards Summary for LOC101929523 Gene

LOC101929523 (Uncharacterized LOC101929523) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929523 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929523 Gene

Genomics for LOC101929523 Gene

GeneHancer (GH) Regulatory Elements for LOC101929523 Gene

Promoters and enhancers for LOC101929523 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J169212 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 600.7 +1.0 997 4 ZFX ZKSCAN8 ELF1 ZNF639 KAT8 POLR2A IKZF1 ZBTB8A NRF1 ZNF512 ENSG00000226445 LOC101929523 LINC01615 THBS2
GH06J169223 Enhancer 0.9 ENCODE dbSUPER 0.4 +11.9 11878 2.4 TRIM24 EGR1 SMARCA4 CREB1 ZIC2 PKNOX1 MNT SCRT2 CTBP1 NFE2 ENSG00000226445 THBS2 LINC01615 LOC101929523
GH06J169186 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.3 -23.8 -23837 5.4 ATF1 SP1 ATF7 ATF2 FOS CREB1 NR2F2 RAD21 REST HLF LINC02544 ENSG00000226445 LINC01615 LOC101929523
GH06J169216 Enhancer 0.5 ENCODE dbSUPER 0.7 +3.8 3838 0.4 RNF2 LINC01615 THBS2 ENSG00000226445 LOC101929523
GH06J169205 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -7.6 -7631 0.8 POLR2A JUND LOC101929523 LINC02544
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929523 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929523 Gene

Genomic Locations for LOC101929523 Gene
chr6:169,213,212-169,239,565
(GRCh38/hg38)
Size:
26,354 bases
Orientation:
Plus strand

Genomic View for LOC101929523 Gene

Genes around LOC101929523 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929523 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929523 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929523 Gene

Proteins for LOC101929523 Gene

Post-translational modifications for LOC101929523 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929523 Gene

Domains & Families for LOC101929523 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929523 Gene

Function for LOC101929523 Gene

Phenotypes From GWAS Catalog for LOC101929523 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929523 Gene

Localization for LOC101929523 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929523 Gene

Pathways & Interactions for LOC101929523 Gene

PathCards logo

SuperPathways for LOC101929523 Gene

No Data Available

Interacting Proteins for LOC101929523 Gene

Gene Ontology (GO) - Biological Process for LOC101929523 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929523 Gene

Drugs & Compounds for LOC101929523 Gene

No Compound Related Data Available

Transcripts for LOC101929523 Gene

mRNA/cDNA for LOC101929523 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929523 Gene

No ASD Table

Relevant External Links for LOC101929523 Gene

GeneLoc Exon Structure for
LOC101929523

Expression for LOC101929523 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929523 Gene

Orthologs for LOC101929523 Gene

No data available for Orthologs and Evolution for LOC101929523 Gene

Paralogs for LOC101929523 Gene

No data available for Paralogs for LOC101929523 Gene

Variants for LOC101929523 Gene

Sequence variations from dbSNP and Humsavar for LOC101929523 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs9406328 risk-factor, Lumbar disc herniation, susceptibility to 169,234,915(+) G/A intron_variant
rs1000097373 -- 169,233,850(+) C/T intron_variant
rs1000163392 -- 169,235,143(+) A/C intron_variant
rs1000192712 -- 169,214,635(+) T/C intron_variant
rs1000196319 -- 169,239,069(+) G/A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929523 Gene

Disorders for LOC101929523 Gene

No disorders were found for LOC101929523 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929523 Gene

Publications for LOC101929523 Gene

No publications were found for LOC101929523 Gene.

No data available for External Links for LOC101929523 Gene

Products for LOC101929523 Gene

Sources for LOC101929523 Gene

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