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Aliases for LOC101929517 Gene

Subcategory (RNA class) for LOC101929517 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101929517 Gene

  • Uncharacterized LOC101929517 3
  • AP003397.1 5

External Ids for LOC101929517 Gene

Previous GeneCards Identifiers for LOC101929517 Gene

  • GC11U902036

Summaries for LOC101929517 Gene

GeneCards Summary for LOC101929517 Gene

LOC101929517 (Uncharacterized LOC101929517) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929517 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929517 Gene

Genomics for LOC101929517 Gene

GeneHancer (GH) Regulatory Elements for LOC101929517 Gene

Promoters and enhancers for LOC101929517 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I128527 Enhancer 0.5 ENCODE dbSUPER 550.8 +1.8 1801 0.7 PRDM1 LOC101929517 LOC105369565 ETS1
GH11I128461 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.4 -31.8 -31759 65 HDGF PKNOX1 FOXA2 SIN3A DMAP1 IRF4 YY1 ZNF143 ZNF207 FOS ETS1 GC11M128486 LOC101929517 FLI1 GC11P128505 MIR6090 GC11M128453
GH11I128288 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11 -228.1 -228128 18.3 HDGF PKNOX1 RB1 BMI1 FEZF1 BATF IRF4 RAD21 YY1 ZNF207 GC11M128298 ETS1 FLI1 LOC101929517 SENCR GC11P128293
GH11I128620 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +99.8 99795 10.8 PKNOX1 SMAD1 RB1 RAD21 ZBTB40 YY1 ZNF766 ZNF143 FOS BCLAF1 FLI1 ETS1 SENCR LOC101929517 ENSG00000255465 LOC105369568 GC11P128667 LOC101929538
GH11I128607 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.4 +84.9 84926 6.8 HDGF PKNOX1 SMAD1 RB1 KLF5 IRF4 ZNF207 ZNF143 ATF7 ETV6 LOC101929517 ETS1 FLI1 ENSG00000270160 LOC105369568
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101929517 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929517 Gene

Genomic Locations for LOC101929517 Gene
chr11:128,526,142-128,530,389
(GRCh38/hg38)
Size:
4,248 bases
Orientation:
Plus strand
chr11:128,396,037-128,400,284
(GRCh37/hg19)

Genomic View for LOC101929517 Gene

Genes around LOC101929517 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929517 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929517 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929517 Gene

Proteins for LOC101929517 Gene

Post-translational modifications for LOC101929517 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929517 Gene

Domains & Families for LOC101929517 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929517 Gene

Function for LOC101929517 Gene

Phenotypes From GWAS Catalog for LOC101929517 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929517 Gene

Localization for LOC101929517 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929517 Gene

Pathways & Interactions for LOC101929517 Gene

SuperPathways for LOC101929517 Gene

No Data Available

Interacting Proteins for LOC101929517 Gene

Gene Ontology (GO) - Biological Process for LOC101929517 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929517 Gene

Drugs & Compounds for LOC101929517 Gene

No Compound Related Data Available

Transcripts for LOC101929517 Gene

mRNA/cDNA for LOC101929517 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929517 Gene

No ASD Table

Relevant External Links for LOC101929517 Gene

GeneLoc Exon Structure for
LOC101929517

Expression for LOC101929517 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929517 Gene

genes like me logo Genes that share expression patterns with LOC101929517: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929517 Gene

Orthologs for LOC101929517 Gene

Evolution for LOC101929517 Gene

ENSEMBL:
Gene Tree for LOC101929517 (if available)
TreeFam:
Gene Tree for LOC101929517 (if available)

No data available for Orthologs for LOC101929517 Gene

Paralogs for LOC101929517 Gene

No data available for Paralogs for LOC101929517 Gene

Variants for LOC101929517 Gene

Sequence variations from dbSNP and Humsavar for LOC101929517 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000346614 -- 128,529,624(+) G/A intron_variant
rs1000520168 -- 128,526,569(+) C/T non_coding_transcript_variant
rs1000735155 -- 128,524,183(+) A/G upstream_transcript_variant
rs1001784740 -- 128,528,214(+) T/C intron_variant
rs1002008596 -- 128,529,999(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929517 Gene

Disorders for LOC101929517 Gene

Additional Disease Information for LOC101929517

No disorders were found for LOC101929517 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929517 Gene

Publications for LOC101929517 Gene

No publications were found for LOC101929517 Gene.

Products for LOC101929517 Gene

Sources for LOC101929517 Gene

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