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Aliases for LOC101929480 Gene

Subcategory (RNA class) for LOC101929480 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929480 Gene

  • Uncharacterized LOC101929480 3
  • LA16c-329F2.1 3

External Ids for LOC101929480 Gene

Previous GeneCards Identifiers for LOC101929480 Gene

  • GC16U901536
  • GC16M001764

Summaries for LOC101929480 Gene

GeneCards Summary for LOC101929480 Gene

LOC101929480 (Uncharacterized LOC101929480) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929480 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929480 Gene

Genomics for LOC101929480 Gene

GeneHancer (GH) Regulatory Elements for LOC101929480 Gene

Promoters and enhancers for LOC101929480 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J001712 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 +2.0 1952 2.8 POLR2A ZIC2 ZBTB44 PAX8 NBN EBF1 ATF7 LOC101929480 ENSG00000261399 TMEM204 MAPK8IP3 ENSG00000275092
GH16J001718 Enhancer 1.1 ENCODE dbSUPER 0.7 -3.8 -3754 2.6 ELF3 CEBPG PRDM1 MLLT1 ZNF644 ZBTB33 ZNF600 ZIC2 TARDBP CEBPA TMEM204 TELO2 LOC101929480 MAPK8IP3 MIR3177
GH16J001720 Enhancer 1.1 ENCODE dbSUPER 0.4 -7.0 -7002 3.4 SP1 CTCF ELF3 ZNF121 CEBPG ZSCAN21 SP7 ZNF548 PRDM1 MLLT1 ENSG00000261505 TELO2 SNORA64 ENSG00000260954 ENSG00000260051 ENSG00000255513 CRAMP1 UBE2I UNKL E4F1
GH16J001731 Enhancer 0.4 Ensembl 0.4 -15.8 -15789 0.8 NFIC GATA3 MIR3177 LOC101929480 MAPK8IP3
GH16J001725 Enhancer 0.2 Ensembl 0.4 -10.4 -10389 0.4 TELO2 MIR3177 LOC101929480 MAPK8IP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929480 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929480 Gene

Genomic Locations for LOC101929480 Gene
chr16:1,713,529-1,715,612
(GRCh38/hg38)
Size:
2,084 bases
Orientation:
Minus strand
chr16:1,763,528-1,764,209
(GRCh37/hg19)
Size:
682 bases
Orientation:
Minus strand

Genomic View for LOC101929480 Gene

Genes around LOC101929480 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929480 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929480 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929480 Gene

Proteins for LOC101929480 Gene

Post-translational modifications for LOC101929480 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929480 Gene

Domains & Families for LOC101929480 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929480 Gene

Function for LOC101929480 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929480 Gene

Localization for LOC101929480 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929480 Gene

Pathways & Interactions for LOC101929480 Gene

PathCards logo

SuperPathways for LOC101929480 Gene

No Data Available

Interacting Proteins for LOC101929480 Gene

Gene Ontology (GO) - Biological Process for LOC101929480 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929480 Gene

Drugs & Compounds for LOC101929480 Gene

No Compound Related Data Available

Transcripts for LOC101929480 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929480 Gene

No ASD Table

Relevant External Links for LOC101929480 Gene

GeneLoc Exon Structure for
LOC101929480

No data available for mRNA/cDNA for LOC101929480 Gene

Expression for LOC101929480 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929480 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929480 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x8.4), Brain - Cerebellum (x7.5), Kidney - Cortex (x5.5), and Brain - Caudate (basal ganglia) (x4.1).
genes like me logo Genes that share expression patterns with LOC101929480: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929480 Gene

Orthologs for LOC101929480 Gene

No data available for Orthologs and Evolution for LOC101929480 Gene

Paralogs for LOC101929480 Gene

No data available for Paralogs for LOC101929480 Gene

Variants for LOC101929480 Gene

Sequence variations from dbSNP and Humsavar for LOC101929480 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000619043 -- 1,716,306(-) A/G/T upstream_transcript_variant
rs1000772768 -- 1,713,947(-) A/G intron_variant
rs1001475762 -- 1,714,353(-) C/T non_coding_transcript_variant
rs1002480319 -- 1,715,415(-) C/A upstream_transcript_variant
rs1002532652 -- 1,715,211(-) G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929480 Gene

Disorders for LOC101929480 Gene

No disorders were found for LOC101929480 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929480 Gene

Publications for LOC101929480 Gene

No publications were found for LOC101929480 Gene.

No data available for External Links for LOC101929480 Gene

Products for LOC101929480 Gene

Sources for LOC101929480 Gene

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