Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC101929479 Gene

Aliases for LOC101929479 Gene

  • Golgin A2 Pseudogene 3
  • Golgin Subfamily A Member 2-Like Protein 3 3
  • Golgin Subfamily A Member 2 3

External Ids for LOC101929479 Gene

Previous GeneCards Identifiers for LOC101929479 Gene

  • GC15U901576
  • GC15M085808
  • GC15M085207
  • GC15M085230
  • GC15M085402
  • GC15M085237
  • GC15M085259
  • GC15M085279
  • GC15M085303
  • GC15M085349
  • GC15M085368
  • GC15M085388
  • GC15M085180

Summaries for LOC101929479 Gene

GeneCards Summary for LOC101929479 Gene

LOC101929479 (Golgin A2 Pseudogene) is a Pseudogene.

Additional gene information for LOC101929479 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929479 Gene

Genomics for LOC101929479 Gene

GeneHancer (GH) Regulatory Elements for LOC101929479 Gene

Promoters and enhancers for LOC101929479 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J085233 Promoter 0.7 Ensembl 600.7 +0.3 294 2.6 POLR2A PKNOX1 ZBTB26 ENSG00000229212 LOC101929479 PIRC75
GH15J085230 Enhancer 0.2 Ensembl 0.7 +4.1 4094 0.2 LOC101929479 PIRC75 ENSG00000229212
GH15J085227 Enhancer 0.2 Ensembl 0.4 +6.7 6694 1.8 PIRC75 LOC101929479 ENSG00000229212
GH15J085219 Enhancer 0.2 Ensembl 0.4 +15.5 15494 0.2 LOC105370948 PIRC75 GC15M085492 ENSG00000229212 LOC101929479
GH15J085217 Enhancer 0.2 Ensembl 0.4 +17.1 17094 1 LOC105370948 GC15M085492 PIRC75 LOC101929479 ENSG00000229212
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929479 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929479 Gene

Genomic Locations for LOC101929479 Gene
chr15:85,205,389-85,234,795
(GRCh38/hg38)
Size:
29,407 bases
Orientation:
Minus strand
chr15:85,747,141-85,778,026
(GRCh37/hg19)
Size:
30,886 bases
Orientation:
Minus strand

Genomic View for LOC101929479 Gene

Genes around LOC101929479 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929479 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929479 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929479 Gene

Proteins for LOC101929479 Gene

Post-translational modifications for LOC101929479 Gene

No Post-translational modifications

Other Protein References for LOC101929479 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC101929479 Gene

Domains & Families for LOC101929479 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929479 Gene

Function for LOC101929479 Gene

Phenotypes for LOC101929479 Gene

genes like me logo Genes that share phenotypes with LOC101929479: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929479 Gene

Localization for LOC101929479 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929479 Gene

Pathways & Interactions for LOC101929479 Gene

PathCards logo

SuperPathways for LOC101929479 Gene

No Data Available

Interacting Proteins for LOC101929479 Gene

Gene Ontology (GO) - Biological Process for LOC101929479 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929479 Gene

Drugs & Compounds for LOC101929479 Gene

No Compound Related Data Available

Transcripts for LOC101929479 Gene

mRNA/cDNA for LOC101929479 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929479 Gene

No ASD Table

Relevant External Links for LOC101929479 Gene

GeneLoc Exon Structure for
LOC101929479

Expression for LOC101929479 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929479 Gene

Orthologs for LOC101929479 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LOC101929479 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC101058196 34
  • 94.91 (n)
Species where no ortholog for LOC101929479 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

No data available for Evolution for LOC101929479 Gene

Paralogs for LOC101929479 Gene

No data available for Paralogs for LOC101929479 Gene

Variants for LOC101929479 Gene

Sequence variations from dbSNP and Humsavar for LOC101929479 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000347348 -- 85,225,596(-) T/C intron_variant
rs1000483223 -- 85,223,008(-) G/T intron_variant
rs1000681044 -- 85,234,325(-) G/A/C/T intron_variant
rs1000742946 -- 85,232,235(-) C/T intron_variant
rs1000816851 -- 85,233,348(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929479 Gene

Disorders for LOC101929479 Gene

No disorders were found for LOC101929479 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929479 Gene

Publications for LOC101929479 Gene

No publications were found for LOC101929479 Gene.

No data available for External Links for LOC101929479 Gene

Products for LOC101929479 Gene

Sources for LOC101929479 Gene

Content
Loading form....