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Aliases for LOC101929473 Gene

Subcategory (RNA class) for LOC101929473 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929473 Gene

  • Uncharacterized LOC101929473 3

External Ids for LOC101929473 Gene

Previous GeneCards Identifiers for LOC101929473 Gene

  • GC11U902071
  • GC11P127023

Summaries for LOC101929473 Gene

GeneCards Summary for LOC101929473 Gene

LOC101929473 (Uncharacterized LOC101929473) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929473 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929473 Gene

Genomics for LOC101929473 Gene

GeneHancer (GH) Regulatory Elements for LOC101929473 Gene

Promoters and enhancers for LOC101929473 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J127075 Enhancer 1 Ensembl ENCODE 0.4 +7.3 7251 1.3 CTCF MLLT1 RAD21 IKZF1 BACH1 IKZF2 ZNF7 ZNF143 ATF7 TRIM22 KIRREL3 LOC101929473 LOC105369562 ENSG00000255087
GH11J127105 Enhancer 0.8 Ensembl ENCODE 0.3 +39.3 39338 2.3 SP1 RXRA YY1 ZBTB33 GABPA HNF4A MAX RAD21 ENSG00000255087 LOC105369562 LOC101929473
GH11J127058 Enhancer 0.4 Ensembl 0.4 -8.4 -8401 0.8 RFX1 POLR2A LOC101929473 GC11P127027 ENSG00000255087
GH11J127052 Enhancer 0.3 Ensembl 0.4 -14.4 -14401 1.2 NFE2 LOC101929473 GC11P127027 ENSG00000255087
GH11J127056 Enhancer 0.3 FANTOM5 0.4 -10.1 -10080 0.1 ZNF512 LOC101929473 GC11P127027 ENSG00000255087
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929473 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929473 Gene

Genomic Locations for LOC101929473 Gene
chr11:127,067,002-127,101,306
(GRCh38/hg38)
Size:
34,305 bases
Orientation:
Plus strand

Genomic View for LOC101929473 Gene

Genes around LOC101929473 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929473 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929473 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929473 Gene

Proteins for LOC101929473 Gene

Post-translational modifications for LOC101929473 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929473 Gene

Domains & Families for LOC101929473 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929473 Gene

Function for LOC101929473 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929473 Gene

Localization for LOC101929473 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929473 Gene

Pathways & Interactions for LOC101929473 Gene

PathCards logo

SuperPathways for LOC101929473 Gene

No Data Available

Interacting Proteins for LOC101929473 Gene

Gene Ontology (GO) - Biological Process for LOC101929473 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929473 Gene

Drugs & Compounds for LOC101929473 Gene

No Compound Related Data Available

Transcripts for LOC101929473 Gene

mRNA/cDNA for LOC101929473 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929473 Gene

No ASD Table

Relevant External Links for LOC101929473 Gene

GeneLoc Exon Structure for
LOC101929473

Expression for LOC101929473 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929473 Gene

Orthologs for LOC101929473 Gene

No data available for Orthologs and Evolution for LOC101929473 Gene

Paralogs for LOC101929473 Gene

No data available for Paralogs for LOC101929473 Gene

Variants for LOC101929473 Gene

Sequence variations from dbSNP and Humsavar for LOC101929473 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000053149 -- 127,070,631(+) T/G intron_variant
rs1000130228 -- 127,076,386(+) G/T intron_variant
rs1000163987 -- 127,094,734(+) G/C intron_variant
rs1000253121 -- 127,074,052(+) G/A intron_variant
rs1000261726 -- 127,091,172(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101929473 Gene

Variant ID Type Subtype PubMed ID
dgv248e199 CNV deletion 23128226
esv2581757 CNV deletion 19546169
esv2673484 CNV deletion 23128226
esv27000 CNV loss 19812545
esv2745220 CNV deletion 23290073
esv3306062 CNV mobile element insertion 20981092
esv3309143 CNV mobile element insertion 20981092
esv3396024 CNV insertion 20981092
esv3628015 CNV loss 21293372
esv3628016 CNV loss 21293372
esv3628017 CNV loss 21293372
nsv528676 CNV loss 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101929473 Gene

Disorders for LOC101929473 Gene

No disorders were found for LOC101929473 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929473 Gene

Publications for LOC101929473 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LOC101929473 Gene

Products for LOC101929473 Gene

Sources for LOC101929473 Gene

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