Aliases for LOC101929473 Gene

Subcategory (RNA class) for LOC101929473 Gene


Number of RNA Genes sources:

3 / 17

Aliases for LOC101929473 Gene

  • Uncharacterized LOC101929473 3
  • NONHSAG010005.2 91
  • Lnc-ST3GAL4-55 165
  • HSALNG0088049 164

External Ids for LOC101929473 Gene

Previous GeneCards Identifiers for LOC101929473 Gene

  • GC11U902071
  • GC11P127067

Summaries for LOC101929473 Gene

GeneCards Summary for LOC101929473 Gene

LOC101929473 (Uncharacterized LOC101929473) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929473 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929473 Gene

Genomics for LOC101929473 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929473 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J127075 Enhancer 1 Ensembl ENCODE 0.2 +52.4 52405 1.5 CTCF ATF7 ZNF7 BACH1 JUND ZNF143 RAD21 TCF12 IKZF2 TRIM22 KIRREL3 LOC105369562 ENSG00000255087 LOC101929473
GH11J127105 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.2 +84.6 84592 2.3 REST SP1 RAD21 YY1 GABPA ZBTB33 HNF4A RXRA MAX SMARCA4 ENSG00000255087 LOC105369562 LOC101929473 KIRREL3
GH11J127058 Enhancer 0.4 Ensembl 0.3 +36.9 36853 0.8 RFX1 POLR2A SMARCA4 ENSG00000255087 LOC101929473 LOC105369562 KIRREL3
GH11J127052 Enhancer 0.3 Ensembl 0.3 +30.7 30653 0.8 NFE2 LOC101929473 ENSG00000255087 KIRREL3 LOC105369562
GH11J127056 Enhancer 0.3 FANTOM5 0.3 +35.2 35174 0.1 ZNF512 ENSG00000255087 LOC101929473 KIRREL3 LOC105369562
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929473 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929473 Gene

Genomic Locations for LOC101929473 Gene
79,573 bases
Plus strand

Genomic View for LOC101929473 Gene

Genes around LOC101929473 on UCSC Golden Path with GeneCards custom track
LOC101929473 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101929473 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929473 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929473 Gene

Proteins for LOC101929473 Gene

Post-translational modifications for LOC101929473 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929473 Gene

Domains & Families for LOC101929473 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929473 Gene

Function for LOC101929473 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929473 Gene

Localization for LOC101929473 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929473 Gene

Pathways & Interactions for LOC101929473 Gene

PathCards logo

SuperPathways for LOC101929473 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929473 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929473 Gene

Drugs & Compounds for LOC101929473 Gene

No Compound Related Data Available

Transcripts for LOC101929473 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101929473 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075B3B8_9606 lncRNA 2323 2

RefSeq: NR_120578,

LNCipedia: lnc-ST3GAL4-55:12,

URS00008B7B85_9606 lncRNA 1667 3

LncBook: HSALNT0183043,

LNCipedia: lnc-ST3GAL4-55:1,


URS00008B2D7C_9606 lncRNA 1571 3

LncBook: HSALNT0183044,

LNCipedia: lnc-ST3GAL4-55:2,


URS00008B2521_9606 lncRNA 1161 3

LncBook: HSALNT0183047,

LNCipedia: lnc-ST3GAL4-55:7,


URS00008B4B63_9606 lncRNA 614 3

LncBook: HSALNT0183060,

LNCipedia: lnc-ST3GAL4-55:16,


LOC101929473 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101929473 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929473 Gene

No ASD Table

Relevant External Links for LOC101929473 Gene

GeneLoc Exon Structure for

Expression for LOC101929473 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929473 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929473

genes like me logo Genes that share expression patterns with LOC101929473: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929473 Gene

Orthologs for LOC101929473 Gene

No data available for Orthologs and Evolution for LOC101929473 Gene

Paralogs for LOC101929473 Gene

No data available for Paralogs for LOC101929473 Gene

Variants for LOC101929473 Gene

Additional dbSNP identifiers (rs#s) for LOC101929473 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929473 Gene

Variant ID Type Subtype PubMed ID
dgv248e199 CNV deletion 23128226
esv2581757 CNV deletion 19546169
esv2673484 CNV deletion 23128226
esv27000 CNV loss 19812545
esv2745220 CNV deletion 23290073
esv3306062 CNV mobile element insertion 20981092
esv3309143 CNV mobile element insertion 20981092
esv3396024 CNV insertion 20981092
esv3628015 CNV loss 21293372
esv3628016 CNV loss 21293372
esv3628017 CNV loss 21293372
nsv528676 CNV loss 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929473 Gene

Disorders for LOC101929473 Gene

No disorders were found for LOC101929473 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929473 Gene

Publications for LOC101929473 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC101929473 Gene

Products for LOC101929473 Gene

Sources for LOC101929473 Gene