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LOC101929473 (Uncharacterized LOC101929473) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH11J127075 | Enhancer | 1 | Ensembl ENCODE | 0.2 | +52.4 | 52405 | 1.5 | CTCF ATF7 ZNF7 BACH1 JUND ZNF143 RAD21 TCF12 IKZF2 TRIM22 | KIRREL3 LOC105369562 ENSG00000255087 LOC101929473 | |
GH11J127105 | Enhancer | 0.9 | Ensembl ENCODE CraniofacialAtlas | 0.2 | +84.6 | 84592 | 2.3 | REST SP1 RAD21 YY1 GABPA ZBTB33 HNF4A RXRA MAX SMARCA4 | ENSG00000255087 LOC105369562 LOC101929473 KIRREL3 | |
GH11J127058 | Enhancer | 0.4 | Ensembl | 0.3 | +36.9 | 36853 | 0.8 | RFX1 POLR2A SMARCA4 | ENSG00000255087 LOC101929473 LOC105369562 KIRREL3 | |
GH11J127052 | Enhancer | 0.3 | Ensembl | 0.3 | +30.7 | 30653 | 0.8 | NFE2 | LOC101929473 ENSG00000255087 KIRREL3 LOC105369562 | |
GH11J127056 | Enhancer | 0.3 | FANTOM5 | 0.3 | +35.2 | 35174 | 0.1 | ZNF512 | ENSG00000255087 LOC101929473 KIRREL3 LOC105369562 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000075B3B8_9606 | lncRNA | 2323 | 2 |
RefSeq: NR_120578, LNCipedia: lnc-ST3GAL4-55:12, |
URS00008B7B85_9606 | lncRNA | 1667 | 3 |
LncBook: HSALNT0183043, LNCipedia: lnc-ST3GAL4-55:1, NONCODE: NONHSAT025044.2, |
URS00008B2D7C_9606 | lncRNA | 1571 | 3 |
LncBook: HSALNT0183044, LNCipedia: lnc-ST3GAL4-55:2, NONCODE: NONHSAT025045.2, |
URS00008B2521_9606 | lncRNA | 1161 | 3 |
LncBook: HSALNT0183047, LNCipedia: lnc-ST3GAL4-55:7, NONCODE: NONHSAT025048.2, |
URS00008B4B63_9606 | lncRNA | 614 | 3 |
LncBook: HSALNT0183060, LNCipedia: lnc-ST3GAL4-55:16, NONCODE: NONHSAT025053.2, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv248e199 | CNV | deletion | 23128226 |
esv2581757 | CNV | deletion | 19546169 |
esv2673484 | CNV | deletion | 23128226 |
esv27000 | CNV | loss | 19812545 |
esv2745220 | CNV | deletion | 23290073 |
esv3306062 | CNV | mobile element insertion | 20981092 |
esv3309143 | CNV | mobile element insertion | 20981092 |
esv3396024 | CNV | insertion | 20981092 |
esv3628015 | CNV | loss | 21293372 |
esv3628016 | CNV | loss | 21293372 |
esv3628017 | CNV | loss | 21293372 |
nsv528676 | CNV | loss | 19592680 |
No disorders were found for LOC101929473 Gene.