LOC101929440 Gene (RNA Gene)

Uncharacterized LOC101929440

GC16P001408
GIFtS:
4

Aliases for LOC101929440 Gene

Subcategory (RNA class) for LOC101929440 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929440 Gene

  • Uncharacterized LOC101929440 3
  • LA16c-312E8.2 3

External Ids for LOC101929440 Gene

Previous GeneCards Identifiers for LOC101929440 Gene

  • GC16U901621
  • GC16P001459

Summaries for LOC101929440 Gene

GeneCards Summary for LOC101929440 Gene

LOC101929440 (Uncharacterized LOC101929440) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929440 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929440 Gene

Genomics for LOC101929440 Gene

GeneHancer (GH) Regulatory Elements for LOC101929440 Gene

Promoters and enhancers for LOC101929440 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J001407 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 750.6 -0.1 -90 1.4 SP1 RBPJ USF2 NFYC MAX MNT CBFA2T2 SP5 POLR2A EGR1 ENSG00000260132 LOC101929440 CCDC154 UNKL HSALNG0108892
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929440 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929440 Gene

Genomic Locations for LOC101929440 Gene
chr16:1,408,404-1,412,251
(GRCh38/hg38)
Size:
3,848 bases
Orientation:
Plus strand
chr16:1,458,835-1,462,249
(GRCh37/hg19)
Size:
3,415 bases
Orientation:
Plus strand

Genomic View for LOC101929440 Gene

Genes around LOC101929440 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929440 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929440 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC101929440 Gene

Proteins for LOC101929440 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC101929440 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929440 Gene

Domains & Families for LOC101929440 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929440 Gene

Function for LOC101929440 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929440 Gene

Localization for LOC101929440 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929440 Gene

Pathways & Interactions for LOC101929440 Gene

PathCards logo

SuperPathways for LOC101929440 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929440 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929440 Gene

Drugs & Compounds for LOC101929440 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC101929440 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929440 Gene

No ASD Table

Relevant External Links for LOC101929440 Gene

GeneLoc Exon Structure for
LOC101929440

No data available for mRNA/cDNA for LOC101929440 Gene

Expression for LOC101929440 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929440 Gene

mRNA expression in normal human tissues for LOC101929440 Gene
mRNA expression by GTEx for LOC101929440 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929440 Gene

This gene is overexpressed in Testis (x28.0).
genes like me logo Genes that share expression patterns with LOC101929440: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929440 Gene

Orthologs for LOC101929440 Gene

No data available for Orthologs and Evolution for LOC101929440 Gene

Paralogs for LOC101929440 Gene

No data available for Paralogs for LOC101929440 Gene

Variants for LOC101929440 Gene

Sequence variations from dbSNP and Humsavar for LOC101929440 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000319282 -- 1,408,339(+) G/A/T non_coding_transcript_variant
rs1000501497 -- 1,412,486(+) C/T downstream_transcript_variant
rs1001282393 -- 1,410,685(+) G/A intron_variant
rs1001831489 -- 1,408,501(+) G/A/C non_coding_transcript_variant
rs1001898892 -- 1,408,370(+) G/A/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929440 Gene

Disorders for LOC101929440 Gene

No disorders were found for LOC101929440 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929440 Gene

Publications for LOC101929440 Gene

No publications were found for LOC101929440 Gene.

No data available for External Links for LOC101929440 Gene

Products for LOC101929440 Gene

Sources for LOC101929440 Gene