Aliases for LOC101929427 Gene

Subcategory (RNA class) for LOC101929427 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC101929427 Gene

  • Uncharacterized LOC101929427 3
  • Lnc-ST3GAL4-4 168
  • NONHSAG009998 92

External Ids for LOC101929427 Gene

Previous GeneCards Identifiers for LOC101929427 Gene

  • GC11U902033
  • GC11P126522

Summaries for LOC101929427 Gene

GeneCards Summary for LOC101929427 Gene

LOC101929427 (Uncharacterized LOC101929427) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929427 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929427 Gene

Genomics for LOC101929427 Gene

GeneHancer (GH) Regulatory Elements for LOC101929427 Gene

Promoters and enhancers for LOC101929427 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J126646 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.4 -5.4 -5377 2.4 JUND FOS REST SRF BHLHE40 ZBTB33 CEBPB MYC STAT3 LOC101929427 KIRREL3-AS1 ST3GAL4 KIRREL3 lnc-KIRREL3-1
GH11J126655 Enhancer 0.6 Ensembl 0.7 +2.5 2473 1.7 MEF2B EBF1 RXRA HNF4A EP300 IKZF1 FOXA1 EZH2 ATF3 SP1 ENSG00000254607 LOC101929427 lnc-ST3GAL4-5 KIRREL3 lnc-KIRREL3-1
GH11J126636 Enhancer 0.7 Ensembl ENCODE 0.4 -14.8 -14777 4.4 JUND FOS RXRA HNF4A MAZ NFE2L2 SP1 LOC101929427 KIRREL3-AS1 ST3GAL4 KIRREL3 lnc-KIRREL3-1
GH11J126607 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 0.3 -44.8 -44777 2.8 CTCF TEAD4 GABPA REST RAD21 TRIM22 SMC3 NANOG TCF12 GATA3 LOC101929427 KIRREL3-AS1 ST3GAL4 KIRREL3 lnc-KIRREL3-1
GH11J126628 Enhancer 0.7 Ensembl ENCODE 0.4 -23.8 -23777 1.6 POLR2A RAD21 RXRA MAX SMARCA4 HNF4A CTCF YY1 EGR1 HNF4G LOC101929427 KIRREL3-AS1 ST3GAL4 KIRREL3 lnc-KIRREL3-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929427 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929427 Gene

Genomic Locations for LOC101929427 Gene
chr11:126,652,778-126,682,104
(GRCh38/hg38)
Size:
29,327 bases
Orientation:
Plus strand
chr11:126,522,747-126,551,999
(GRCh37/hg19)
Size:
29,253 bases
Orientation:
Plus strand

Genomic View for LOC101929427 Gene

Genes around LOC101929427 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929427 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929427 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929427 Gene

Proteins for LOC101929427 Gene

Post-translational modifications for LOC101929427 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929427 Gene

Domains & Families for LOC101929427 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929427 Gene

Function for LOC101929427 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929427 Gene

Localization for LOC101929427 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929427 Gene

Pathways & Interactions for LOC101929427 Gene

PathCards logo

SuperPathways for LOC101929427 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101929427 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929427 Gene

Drugs & Compounds for LOC101929427 Gene

No Compound Related Data Available

Transcripts for LOC101929427 Gene

mRNA/cDNA for LOC101929427 Gene

3 RNACentral transcripts :
2 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 NONCODE transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929427 Gene

No ASD Table

Relevant External Links for LOC101929427 Gene

GeneLoc Exon Structure for
LOC101929427

Expression for LOC101929427 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929427 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929427 Gene

This gene is overexpressed in Liver (x40.5).
genes like me logo Genes that share expression patterns with LOC101929427: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929427 Gene

Orthologs for LOC101929427 Gene

No data available for Orthologs and Evolution for LOC101929427 Gene

Paralogs for LOC101929427 Gene

No data available for Paralogs for LOC101929427 Gene

Variants for LOC101929427 Gene

Additional dbSNP identifiers (rs#s) for LOC101929427 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929427 Gene

Disorders for LOC101929427 Gene

No disorders were found for LOC101929427 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929427 Gene

Publications for LOC101929427 Gene

No publications were found for LOC101929427 Gene.

No data available for Mastermind for LOC101929427 Gene

Products for LOC101929427 Gene

Sources for LOC101929427 Gene