Aliases for LOC101929388 Gene

Subcategory (RNA class) for LOC101929388 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929388 Gene

  • Uncharacterized LOC101929388 3

External Ids for LOC101929388 Gene

Previous GeneCards Identifiers for LOC101929388 Gene

  • GC01U903883

Summaries for LOC101929388 Gene

GeneCards Summary for LOC101929388 Gene

LOC101929388 (Uncharacterized LOC101929388) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929388 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929388 Gene

Genomics for LOC101929388 Gene

GeneHancer (GH) Regulatory Elements for LOC101929388 Gene

Promoters and enhancers for LOC101929388 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J202237 Enhancer 0.9 ENCODE dbSUPER 750.6 +1.7 1683 0.3 HDGF ZSCAN21 PRDM1 GLIS2 ZIC2 ZBTB8A PRDM10 PATZ1 CTCF ZNF692 LOC101929388 NONHSAG003956.2 lnc-PTPN7-2 IPO9-AS1 ENSG00000235121 IPO9 RF01210-033 LGR6
GH01J202238 Enhancer 0.3 dbSUPER 750.6 -0.4 -427 1.1 ZSCAN4 ZBTB33 LOC101929388 NONHSAG003956.2 lnc-PTPN7-2 LGR6 piR-61128
GH01J202233 Enhancer 1.1 ENCODE dbSUPER 0.6 +3.7 3729 3.8 CTCF HLF L3MBTL2 MAX HDGF ZKSCAN8 BCL6B CEBPG SP7 ZSCAN21 IPO9 IPO9-AS1 ENSG00000235121 LGR6 KDM5B PTPRVP LOC101929388 RF01210-033 NONHSAG003956.2 lnc-PTPN7-2
GH01J202228 Enhancer 0.7 Ensembl dbSUPER 0.4 +10.9 10856 1.4 NFE2 ZNF10 NR2F1 FOSL1 BCOR FOS LGR6 RF01210-033 lnc-PTPN7-2 LOC101929388 HSALNG0009715
GH01J202230 Enhancer 0.2 dbSUPER 0.4 +8.0 7980 1.4 RF01210-033 LGR6 LOC101929388 lnc-PTPN7-2 HSALNG0009715
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929388 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929388 Gene

Genomic Locations for LOC101929388 Gene
chr1:202,227,318-202,238,957
(GRCh38/hg38)
Size:
11,640 bases
Orientation:
Minus strand

Genomic View for LOC101929388 Gene

Genes around LOC101929388 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929388 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929388 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929388 Gene

Proteins for LOC101929388 Gene

Post-translational modifications for LOC101929388 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929388 Gene

Domains & Families for LOC101929388 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929388 Gene

Function for LOC101929388 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929388 Gene

Localization for LOC101929388 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929388 Gene

Pathways & Interactions for LOC101929388 Gene

PathCards logo

SuperPathways for LOC101929388 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929388 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929388 Gene

Drugs & Compounds for LOC101929388 Gene

No Compound Related Data Available

Transcripts for LOC101929388 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929388 Gene

No ASD Table

Relevant External Links for LOC101929388 Gene

GeneLoc Exon Structure for
LOC101929388

No data available for mRNA/cDNA for LOC101929388 Gene

Expression for LOC101929388 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929388 Gene

Orthologs for LOC101929388 Gene

No data available for Orthologs and Evolution for LOC101929388 Gene

Paralogs for LOC101929388 Gene

No data available for Paralogs for LOC101929388 Gene

Variants for LOC101929388 Gene

Sequence variations from dbSNP and Humsavar for LOC101929388 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000405922 -- 202,232,433(-) G/A intron_variant
rs1000507582 -- 202,236,501(-) C/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000622174 -- 202,236,797(-) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000849017 -- 202,232,181(-) G/A intron_variant
rs1000955022 -- 202,236,620(-) G/A/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929388 Gene

Disorders for LOC101929388 Gene

No disorders were found for LOC101929388 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929388 Gene

Publications for LOC101929388 Gene

No publications were found for LOC101929388 Gene.

No data available for External Links for LOC101929388 Gene

Products for LOC101929388 Gene

Sources for LOC101929388 Gene