Aliases for LOC101929331 Gene

Data sources for LOC101929331 Gene:

RNA type for LOC101929331 Gene

lncRNA

Aliases for LOC101929331 Gene

External Ids for LOC101929331 Gene

Previous GeneCards Identifiers for LOC101929331 Gene

  • GC09U901991

Summaries for LOC101929331 Gene

GeneCards Summary for LOC101929331 Gene

LOC101929331 (Uncharacterized LOC101929331) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929331 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929331 Gene

Genomics for LOC101929331 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929331 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929331 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929331 Gene

Latest Assembly
chr9:129,281,525-129,313,636
(GRCh38/hg38)
Size:
32,112 bases
Orientation:
Plus strand

Previous Assembly
chr9:132,044,695-132,047,998
(GRCh37/hg19 by Entrez Gene)
Size:
3,304 bases
Orientation:
Plus strand

chr9:132,044,737-132,048,007
(GRCh37/hg19 by Ensembl)
Size:
3,271 bases
Orientation:
Plus strand

Genomic View for LOC101929331 Gene

Genes around LOC101929331 on UCSC Golden Path with GeneCards custom track
LOC101929331 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101929331 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929331 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929331 Gene

Proteins for LOC101929331 Gene

Post-translational modifications for LOC101929331 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929331 Gene

Domains & Families for LOC101929331 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929331 Gene

Function for LOC101929331 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929331 Gene

Localization for LOC101929331 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929331 Gene

Pathways & Interactions for LOC101929331 Gene

PathCards logo

SuperPathways for LOC101929331 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929331 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929331 Gene

Drugs & Compounds for LOC101929331 Gene

No Compound Related Data Available

Transcripts for LOC101929331 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101929331 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000759B2B_9606 lncRNA 616 3

RefSeq: NR_121587,

LncBook: HSALNT0155872,

LNCipedia: lnc-PTPA-3:1,

URS000014BDDE_9606 lncRNA 586 3

Ensembl: ENST00000455981 (view in UCSC) ,

LNCipedia: lnc-PTPA-3:2,

NONCODE: NONHSAT135036.2,

URS0000EF0C9B_9606 lncRNA 933 1

Ensembl: ENST00000664782 (view in UCSC) ,

URS0000D5A3C1_9606 lncRNA 1699 2

LncBook: HSALNT0155875,

LNCipedia: lnc-PTPA-3:8,

URS00009BC25F_9606 lncRNA 613 2

LncBook: HSALNT0155869,

NONCODE: NONHSAT220250.1,

LOC101929331 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101929331 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929331 Gene

No ASD Table

Relevant External Links for LOC101929331 Gene

GeneLoc Exon Structure for
LOC101929331

Expression for LOC101929331 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929331 Gene

genes like me logo Genes that share expression patterns with LOC101929331: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929331 Gene

Orthologs for LOC101929331 Gene

Evolution for LOC101929331 Gene

ENSEMBL:
Gene Tree for LOC101929331 (if available)
TreeFam:
Gene Tree for LOC101929331 (if available)

No data available for Orthologs for LOC101929331 Gene

Paralogs for LOC101929331 Gene

No data available for Paralogs for LOC101929331 Gene

Variants for LOC101929331 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101929331 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929331 Gene

Disorders for LOC101929331 Gene

Additional Disease Information for LOC101929331

Open Targets Platform
Open Targets Platform

No disorders were found for LOC101929331 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929331 Gene

Publications for LOC101929331 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

No data available for Mastermind for LOC101929331 Gene

Products for LOC101929331 Gene

Sources for LOC101929331 Gene