Aliases for LOC101929315 Gene

Subcategory (RNA class) for LOC101929315 Gene

lncRNA

Aliases for LOC101929315 Gene

  • Uncharacterized LOC101929315 3

External Ids for LOC101929315 Gene

Previous GeneCards Identifiers for LOC101929315 Gene

  • GC08U901738

Summaries for LOC101929315 Gene

GeneCards Summary for LOC101929315 Gene

LOC101929315 (Uncharacterized LOC101929315) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929315 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929315 Gene

Genomics for LOC101929315 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929315 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J024509 Enhancer 0.5 ENCODE 0.4 +5.4 5362 0.5 FOXA1 NFE2 JUND FOSL2 BACH1 MAFK ADAM7 ENSG00000253643 LOC101929315 piR-36588-427 LOC101929294 ENSG00000253535 NEFM
GH08J024524 Enhancer 0.4 FANTOM5 0.4 -10.0 -10022 0.1 CREB1 LOC107986932 LOC101929315 LOC101929294 ADAM7 ENSG00000253535 NEFM
GH08J024494 Enhancer 0.3 Ensembl 0.4 +20.0 19967 0.6 POLR2A piR-36588-427 ADAM7 ENSG00000253643 LOC101929315 piR-46002-542 LOC101929294 ENSG00000253535 NEFM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929315 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929315 Gene

Genomic Locations for LOC101929315 Gene
chr8:24,490,312-24,514,868
(GRCh38/hg38)
Size:
24,557 bases
Orientation:
Minus strand

Genomic View for LOC101929315 Gene

Genes around LOC101929315 on UCSC Golden Path with GeneCards custom track
LOC101929315 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101929315 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929315 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929315 Gene

Proteins for LOC101929315 Gene

Post-translational modifications for LOC101929315 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929315 Gene

Domains & Families for LOC101929315 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929315 Gene

Function for LOC101929315 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929315 Gene

Localization for LOC101929315 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929315 Gene

Pathways & Interactions for LOC101929315 Gene

PathCards logo

SuperPathways for LOC101929315 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929315 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929315 Gene

Drugs & Compounds for LOC101929315 Gene

No Compound Related Data Available

Transcripts for LOC101929315 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101929315 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007E4591_9606 lncRNA 942 1

RefSeq: NR_125809,

LOC101929315 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101929315 Gene

6 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929315 Gene

No ASD Table

Relevant External Links for LOC101929315 Gene

GeneLoc Exon Structure for
LOC101929315

Expression for LOC101929315 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929315 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929315

genes like me logo Genes that share expression patterns with LOC101929315: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929315 Gene

Orthologs for LOC101929315 Gene

No data available for Orthologs and Evolution for LOC101929315 Gene

Paralogs for LOC101929315 Gene

No data available for Paralogs for LOC101929315 Gene

Variants for LOC101929315 Gene

Additional dbSNP identifiers (rs#s) for LOC101929315 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929315 Gene

Variant ID Type Subtype PubMed ID
dgv452n21 CNV loss 19592680
dgv7141n100 CNV loss 25217958
esv3424387 CNV insertion 20981092
esv3891377 CNV loss 25118596

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929315 Gene

Disorders for LOC101929315 Gene

No disorders were found for LOC101929315 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929315 Gene

Publications for LOC101929315 Gene

No publications were found for LOC101929315 Gene.

No data available for Mastermind for LOC101929315 Gene

Products for LOC101929315 Gene

Sources for LOC101929315 Gene