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Aliases for LOC101929298 Gene

Subcategory (RNA class) for LOC101929298 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929298 Gene

  • Uncharacterized LOC101929298 3

External Ids for LOC101929298 Gene

Previous GeneCards Identifiers for LOC101929298 Gene

  • GC03U902040
  • GC03M097765

Summaries for LOC101929298 Gene

GeneCards Summary for LOC101929298 Gene

LOC101929298 (Uncharacterized LOC101929298) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929298 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929298 Gene

Genomics for LOC101929298 Gene

GeneHancer (GH) Regulatory Elements for LOC101929298 Gene

Promoters and enhancers for LOC101929298 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J097820 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 600.7 -1.1 -1086 3.9 ZNF652 POLR2A ZNF687 NFRKB PRDM1 ZNF547 IKZF1 RNF2 ZBTB8A ZNF600 ENSG00000282527 LOC101929298 CRYBG3 RIOX2 LOC105373994
GH03J097817 Enhancer 0.7 Ensembl dbSUPER 0.7 +3.7 3675 0.6 PKNOX1 POLR2A OSR2 FEZF1 PRDM6 ARL6 RIOX2 ENSG00000282527 LOC101929298 GC03M097791
GH03J097816 Enhancer 0.5 Ensembl dbSUPER 0.7 +4.9 4875 0.2 ATF2 ARL6 RIOX2 ENSG00000282527 LOC101929298 GC03M097791
GH03J097814 Enhancer 0.4 Ensembl dbSUPER 0.4 +7.3 7275 0.6 ARL6 RIOX2 CRYBG3 LOC101929298 ENSG00000282527 GC03M097791
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929298 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929298 Gene

Genomic Locations for LOC101929298 Gene
chr3:97,800,805-97,821,776
(GRCh38/hg38)
Size:
20,972 bases
Orientation:
Minus strand

Genomic View for LOC101929298 Gene

Genes around LOC101929298 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929298 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929298 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929298 Gene

Proteins for LOC101929298 Gene

Post-translational modifications for LOC101929298 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929298 Gene

Domains & Families for LOC101929298 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929298 Gene

Function for LOC101929298 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929298 Gene

Localization for LOC101929298 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929298 Gene

Pathways & Interactions for LOC101929298 Gene

PathCards logo

SuperPathways for LOC101929298 Gene

No Data Available

Interacting Proteins for LOC101929298 Gene

Gene Ontology (GO) - Biological Process for LOC101929298 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929298 Gene

Drugs & Compounds for LOC101929298 Gene

No Compound Related Data Available

Transcripts for LOC101929298 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929298 Gene

No ASD Table

Relevant External Links for LOC101929298 Gene

GeneLoc Exon Structure for
LOC101929298

No data available for mRNA/cDNA for LOC101929298 Gene

Expression for LOC101929298 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929298 Gene

Orthologs for LOC101929298 Gene

No data available for Orthologs and Evolution for LOC101929298 Gene

Paralogs for LOC101929298 Gene

No data available for Paralogs for LOC101929298 Gene

Variants for LOC101929298 Gene

Sequence variations from dbSNP and Humsavar for LOC101929298 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000382191 -- 97,823,392(-) CC/CCC upstream_transcript_variant
rs1000831899 -- 97,818,890(-) C/T intron_variant
rs1000870319 -- 97,823,226(-) T/G upstream_transcript_variant
rs1000925368 -- 97,818,617(-) A/C intron_variant
rs1001038542 -- 97,811,854(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929298 Gene

Disorders for LOC101929298 Gene

No disorders were found for LOC101929298 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929298 Gene

Publications for LOC101929298 Gene

No publications were found for LOC101929298 Gene.

No data available for External Links for LOC101929298 Gene

Products for LOC101929298 Gene

Sources for LOC101929298 Gene

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