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Aliases for LOC101929295 Gene

Subcategory (RNA class) for LOC101929295 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929295 Gene

  • Uncharacterized LOC101929295 3

External Ids for LOC101929295 Gene

Previous GeneCards Identifiers for LOC101929295 Gene

  • GC11U902079
  • GC11P094888
  • GC11P095151

Summaries for LOC101929295 Gene

GeneCards Summary for LOC101929295 Gene

LOC101929295 (Uncharacterized LOC101929295) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929295 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929295 Gene

Genomics for LOC101929295 Gene

GeneHancer (GH) Regulatory Elements for LOC101929295 Gene

Promoters and enhancers for LOC101929295 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J095146 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 600.7 0.0 -10 7.8 CC2D1A ELF3 CTCF ZKSCAN8 CBFA2T2 ZNF148 NKRF MLLT1 GTF2F1 ZNF687 ENSG00000245552 LOC101929295 CEP57 FAM76B FGFR3P2 SESN3 ANKRD49 MRE11 SRSF8 ENDOD1
GH11J095154 Enhancer 0.7 ENCODE 0.7 +4.1 4143 0.2 CTCF TRIM24 RAD21 ARID2 ZNF143 REST TRIM22 ZNF316 BCLAF1 SMC3 SESN3 ENSG00000270578 LOC101929295 ENSG00000245552 GC11M095158
GH11J095156 Enhancer 0.9 Ensembl ENCODE 0.4 +7.2 7165 3 CC2D1A CTCF TRIM24 ZBTB33 PKNOX1 REST ZNF24 ZBTB48 ZNF580 TRIM28 ENDOD1 CEP57 FAM76B SESN3 GC11M095158 LOC101929295 ENSG00000245552
GH11J095160 Enhancer 0.2 Ensembl 0.4 +9.9 9862 0.4 GC11M095158 CEP57 FAM76B ENDOD1 SESN3 LOC101929295 ENSG00000245552
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929295 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929295 Gene

Genomic Locations for LOC101929295 Gene
chr11:95,150,539-95,159,148
(GRCh38/hg38)
Size:
8,610 bases
Orientation:
Plus strand
chr11:94,883,703-94,967,268
(GRCh37/hg19)
Size:
83,566 bases
Orientation:
Plus strand

Genomic View for LOC101929295 Gene

Genes around LOC101929295 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929295 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929295 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929295 Gene

Proteins for LOC101929295 Gene

Post-translational modifications for LOC101929295 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929295 Gene

Domains & Families for LOC101929295 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929295 Gene

Function for LOC101929295 Gene

Phenotypes From GWAS Catalog for LOC101929295 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929295 Gene

Localization for LOC101929295 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929295 Gene

Pathways & Interactions for LOC101929295 Gene

PathCards logo

SuperPathways for LOC101929295 Gene

No Data Available

Interacting Proteins for LOC101929295 Gene

Gene Ontology (GO) - Biological Process for LOC101929295 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929295 Gene

Drugs & Compounds for LOC101929295 Gene

No Compound Related Data Available

Transcripts for LOC101929295 Gene

mRNA/cDNA for LOC101929295 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929295 Gene

No ASD Table

Relevant External Links for LOC101929295 Gene

GeneLoc Exon Structure for
LOC101929295

Expression for LOC101929295 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929295 Gene

mRNA expression in normal human tissues for LOC101929295 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929295 Gene

This gene is overexpressed in Testis (x9.4).
genes like me logo Genes that share expression patterns with LOC101929295: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929295 Gene

Orthologs for LOC101929295 Gene

No data available for Orthologs and Evolution for LOC101929295 Gene

Paralogs for LOC101929295 Gene

No data available for Paralogs for LOC101929295 Gene

Variants for LOC101929295 Gene

Sequence variations from dbSNP and Humsavar for LOC101929295 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000044095 -- 95,153,321(+) A/G intron_variant
rs1000197769 -- 95,155,682(+) G/A intron_variant
rs1000553527 -- 95,156,205(+) A/T intron_variant
rs1000615571 -- 95,159,333(+) C/T downstream_transcript_variant
rs1000646865 -- 95,159,032(+) G/A non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101929295 Gene

Variant ID Type Subtype PubMed ID
esv2669678 CNV deletion 23128226
esv3627338 CNV loss 21293372
nsv1050445 CNV gain 25217958

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101929295 Gene

Disorders for LOC101929295 Gene

No disorders were found for LOC101929295 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929295 Gene

Publications for LOC101929295 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LOC101929295 Gene

Products for LOC101929295 Gene

Sources for LOC101929295 Gene

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