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Aliases for LOC101929285 Gene

Subcategory (RNA class) for LOC101929285 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929285 Gene

  • Uncharacterized LOC101929285 3

External Ids for LOC101929285 Gene

Previous GeneCards Identifiers for LOC101929285 Gene

  • GC06U902432
  • GC06M035605
  • GC06M035614
  • GC06M038989
  • GC06M036313
  • GC06M036683
  • GC06M037038
  • GC06M037391
  • GC06M037748
  • GC06M038095
  • GC06M038488
  • GC06M038834

Summaries for LOC101929285 Gene

GeneCards Summary for LOC101929285 Gene

LOC101929285 (Uncharacterized LOC101929285) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929285 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929285 Gene

Genomics for LOC101929285 Gene

GeneHancer (GH) Regulatory Elements for LOC101929285 Gene

Promoters and enhancers for LOC101929285 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J035258 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 600.7 -0.5 -519 4.6 HDGF SP1 ELF3 ZFX MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 ZNF76 TCP11 LOC101929285 GC06M040567 TAF11 ENSG00000272374 DEF6 BRPF3 RPL10A RPS10
GH06J035247 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +10.4 10398 2.4 MAFK PRDM1 SMARCA4 ARID2 DPF2 IKZF1 BACH1 ZNF316 EED CTBP1 DEF6 ZNF76 SCUBE3 TEAD3 TULP1 TCP11 UHRF1BP1 PIR55616 LOC101929285 GC06M040595
GH06J035241 Enhancer 1.1 Ensembl ENCODE 0.4 +18.0 18045 1.5 CC2D1A ELF3 CTCF CEBPG AHR PPARG PRDM1 RAD21 ARID2 RFX1 TCP11 SCUBE3 GC06M040595 PIR55616 LOC101929285
GH06J035237 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +20.4 20397 2.8 SP1 POLR2A NR2F2 SIN3A GLIS1 TCP11 UHRF1BP1 ZNF76 SCUBE3 DEF6 GC06M040595 PIR55616 LOC101929285
GH06J035224 Enhancer 0.6 Ensembl dbSUPER 0.3 +34.4 34397 0.4 ZIC2 POLR2A ENSG00000272374 ZNF76 TCP11 GC06M040595 SCUBE3 LOC101929285
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929285 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929285 Gene

Genomic Locations for LOC101929285 Gene
chr6:35,224,649-35,259,398
(GRCh38/hg38)
Size:
34,750 bases
Orientation:
Minus strand

Genomic View for LOC101929285 Gene

Genes around LOC101929285 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929285 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929285 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929285 Gene

Proteins for LOC101929285 Gene

Post-translational modifications for LOC101929285 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929285 Gene

Domains & Families for LOC101929285 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929285 Gene

Function for LOC101929285 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929285 Gene

Localization for LOC101929285 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929285 Gene

Pathways & Interactions for LOC101929285 Gene

PathCards logo

SuperPathways for LOC101929285 Gene

No Data Available

Interacting Proteins for LOC101929285 Gene

Gene Ontology (GO) - Biological Process for LOC101929285 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929285 Gene

Drugs & Compounds for LOC101929285 Gene

No Compound Related Data Available

Transcripts for LOC101929285 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929285 Gene

No ASD Table

Relevant External Links for LOC101929285 Gene

GeneLoc Exon Structure for
LOC101929285

No data available for mRNA/cDNA for LOC101929285 Gene

Expression for LOC101929285 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929285 Gene

Orthologs for LOC101929285 Gene

No data available for Orthologs and Evolution for LOC101929285 Gene

Paralogs for LOC101929285 Gene

No data available for Paralogs for LOC101929285 Gene

Variants for LOC101929285 Gene

Sequence variations from dbSNP and Humsavar for LOC101929285 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs193920941 uncertain-significance, Malignant tumor of prostate 35,245,288(-) C/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000057218 -- 35,259,759(-) G/C upstream_transcript_variant
rs1000107771 -- 35,248,083(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000140749 -- 35,235,942(-) T/ genic_downstream_transcript_variant, intron_variant
rs1000193646 -- 35,236,242(-) G/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929285 Gene

Disorders for LOC101929285 Gene

No disorders were found for LOC101929285 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929285 Gene

Publications for LOC101929285 Gene

No publications were found for LOC101929285 Gene.

No data available for External Links for LOC101929285 Gene

Products for LOC101929285 Gene

Sources for LOC101929285 Gene

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