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Aliases for LOC101929272 Gene

Subcategory (RNA class) for LOC101929272 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929272 Gene

  • Uncharacterized LOC101929272 3

External Ids for LOC101929272 Gene

Previous GeneCards Identifiers for LOC101929272 Gene

  • GC02U902711

Summaries for LOC101929272 Gene

GeneCards Summary for LOC101929272 Gene

LOC101929272 (Uncharacterized LOC101929272) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929272 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929272 Gene

Genomics for LOC101929272 Gene

GeneHancer (GH) Regulatory Elements for LOC101929272 Gene

Promoters and enhancers for LOC101929272 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J025416 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 600.7 -1.1 -1076 5.4 SP1 ZNF148 NKRF POLR2A ZNF687 RELA CREM MLLT1 ZBED1 IKZF1 ENSG00000224220 LOC101929272 GC02M025388 GC02M025387 DTNB
GH02J025424 Enhancer 0.7 Ensembl dbSUPER 0.7 +4.0 3971 1 RELA IKZF1 IKZF2 SMARCA5 ATF2 ENSG00000224220 LOC101929272 GC02M025457 GC02M025456 DTNB
GH02J025410 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -10.1 -10106 3.2 ZNF687 ZNF24 RELA CREM MLLT1 IKZF1 IKZF2 CBFB EED RUNX3 LOC101929272 GC02M025388 GC02M025387 DTNB
GH02J025399 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -19.0 -19030 7 SP1 ZNF687 SP7 CREM MLLT1 RELA ZBED1 IKZF1 POLR2A ZBTB33 ASXL2 DTNB DNMT3A GC02M025388 GC02M025387 LOC101929272
GH02J025423 Enhancer 0.6 FANTOM5 dbSUPER 0.7 +2.7 2719 0.3 ATF2 ATF7 LOC101929272 ENSG00000224220 GC02M025457 GC02M025456 DTNB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929272 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929272 Gene

Genomic Locations for LOC101929272 Gene
chr2:25,420,730-25,441,645
(GRCh38/hg38)
Size:
20,916 bases
Orientation:
Plus strand

Genomic View for LOC101929272 Gene

Genes around LOC101929272 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929272 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929272 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929272 Gene

Proteins for LOC101929272 Gene

Post-translational modifications for LOC101929272 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929272 Gene

Domains & Families for LOC101929272 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929272 Gene

Function for LOC101929272 Gene

Phenotypes From GWAS Catalog for LOC101929272 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929272 Gene

Localization for LOC101929272 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929272 Gene

Pathways & Interactions for LOC101929272 Gene

PathCards logo

SuperPathways for LOC101929272 Gene

No Data Available

Interacting Proteins for LOC101929272 Gene

Gene Ontology (GO) - Biological Process for LOC101929272 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929272 Gene

Drugs & Compounds for LOC101929272 Gene

No Compound Related Data Available

Transcripts for LOC101929272 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929272 Gene

No ASD Table

Relevant External Links for LOC101929272 Gene

GeneLoc Exon Structure for
LOC101929272

No data available for mRNA/cDNA for LOC101929272 Gene

Expression for LOC101929272 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929272 Gene

Orthologs for LOC101929272 Gene

No data available for Orthologs and Evolution for LOC101929272 Gene

Paralogs for LOC101929272 Gene

No data available for Paralogs for LOC101929272 Gene

Variants for LOC101929272 Gene

Sequence variations from dbSNP and Humsavar for LOC101929272 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000132682 -- 25,426,020(+) A/G genic_upstream_transcript_variant, intron_variant
rs1000173790 -- 25,425,583(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000289901 -- 25,431,335(+) T/C/G genic_downstream_transcript_variant, genic_upstream_transcript_variant, intron_variant
rs1000450897 -- 25,424,598(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000549675 -- 25,427,442(+) G/A genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929272 Gene

Disorders for LOC101929272 Gene

No disorders were found for LOC101929272 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929272 Gene

Publications for LOC101929272 Gene

No publications were found for LOC101929272 Gene.

No data available for External Links for LOC101929272 Gene

Products for LOC101929272 Gene

Sources for LOC101929272 Gene

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