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Aliases for LOC101929270 Gene

Subcategory (RNA class) for LOC101929270 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929270 Gene

  • Uncharacterized LOC101929270 3

External Ids for LOC101929270 Gene

Previous GeneCards Identifiers for LOC101929270 Gene

  • GC09U901868

Summaries for LOC101929270 Gene

GeneCards Summary for LOC101929270 Gene

LOC101929270 (Uncharacterized LOC101929270) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC101929270 include Lethal Congenital Contracture Syndrome 1 and Anterior Horn Cell Disease.

Additional gene information for LOC101929270 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929270 Gene

Genomics for LOC101929270 Gene

GeneHancer (GH) Regulatory Elements for LOC101929270 Gene

Promoters and enhancers for LOC101929270 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J128503 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 +38.7 38736 2.5 HDGF SP1 CC2D1A ZFX ELF3 MNT NKRF POLR2A RERE GTF2F1 GLE1 COQ4 ODF2-AS1 WDR34 PKN3 SPTAN1 ENSG00000228395 URM1 FPGS GOLGA2
GH09J128523 Enhancer 0.8 Ensembl ENCODE 0.3 +20.0 20024 0.9 SP1 RXRA ZIC2 YY1 RAD21 HNF4A EGR1 HNF4G ENSG00000273186 GLE1 LOC101929270
GH09J128540 Enhancer 0.3 Ensembl 0.7 +2.1 2077 2.4 ZNF121 ENSG00000273186 SH2D3C LOC101929270 ENSG00000228395 GLE1
GH09J128512 Enhancer 0.6 ENCODE 0.3 +31.3 31271 0.1 IKZF1 IKZF2 PKNOX1 TRIM22 DPF2 HDGF NBN ATF1 FOXK2 ENSG00000228395 SPTAN1 RNU7-171P PKN3 ENSG00000223478 ZDHHC12 GLE1 LOC101929270
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929270 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929270 Gene

Genomic Locations for LOC101929270 Gene
chr9:128,528,657-128,543,478
(GRCh38/hg38)
Size:
14,822 bases
Orientation:
Minus strand

Genomic View for LOC101929270 Gene

Genes around LOC101929270 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929270 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929270 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929270 Gene

Proteins for LOC101929270 Gene

Post-translational modifications for LOC101929270 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929270 Gene

Domains & Families for LOC101929270 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929270 Gene

Function for LOC101929270 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929270 Gene

Localization for LOC101929270 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929270 Gene

Pathways & Interactions for LOC101929270 Gene

PathCards logo

SuperPathways for LOC101929270 Gene

No Data Available

Interacting Proteins for LOC101929270 Gene

Gene Ontology (GO) - Biological Process for LOC101929270 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929270 Gene

Drugs & Compounds for LOC101929270 Gene

No Compound Related Data Available

Transcripts for LOC101929270 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929270 Gene

No ASD Table

Relevant External Links for LOC101929270 Gene

GeneLoc Exon Structure for
LOC101929270

No data available for mRNA/cDNA for LOC101929270 Gene

Expression for LOC101929270 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929270 Gene

Orthologs for LOC101929270 Gene

No data available for Orthologs and Evolution for LOC101929270 Gene

Paralogs for LOC101929270 Gene

No data available for Paralogs for LOC101929270 Gene

Variants for LOC101929270 Gene

Sequence variations from dbSNP and Humsavar for LOC101929270 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs10513496 likely-benign, Lethal Congenital Contracture Syndrome, Lethal arthrogryposis with anterior horn cell disease 128,541,351(-) C/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs10760563 benign, Lethal Congenital Contracture Syndrome, Lethal arthrogryposis with anterior horn cell disease 128,541,243(-) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs121434407 pathogenic, likely-pathogenic, Lethal congenital contracture syndrome 1, Inborn genetic diseases 128,536,414(-) G/A intron_variant
rs121434408 pathogenic, Lethal arthrogryposis with anterior horn cell disease 128,538,058(-) G/A intron_variant
rs121434409 pathogenic, Lethal arthrogryposis with anterior horn cell disease 128,541,124(-) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929270 Gene

Disorders for LOC101929270 Gene

MalaCards: The human disease database

(2) MalaCards diseases for LOC101929270 Gene - From: GeneCards

- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC101929270: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929270 Gene

Publications for LOC101929270 Gene

No publications were found for LOC101929270 Gene.

No data available for External Links for LOC101929270 Gene

Products for LOC101929270 Gene

Sources for LOC101929270 Gene

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