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Aliases for LOC101929269 Gene

Subcategory (RNA class) for LOC101929269 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929269 Gene

  • Uncharacterized LOC101929269 3

External Ids for LOC101929269 Gene

Previous GeneCards Identifiers for LOC101929269 Gene

  • GC08U901824
  • GC08M010921

Summaries for LOC101929269 Gene

GeneCards Summary for LOC101929269 Gene

LOC101929269 (Uncharacterized LOC101929269) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929269 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929269 Gene

Genomics for LOC101929269 Gene

GeneHancer (GH) Regulatory Elements for LOC101929269 Gene

Promoters and enhancers for LOC101929269 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J011063 Promoter/Enhancer 1.5 Ensembl ENCODE 600.7 +1.5 1456 4.2 SP7 CREB1 ZNF600 PRDM10 ZIC2 ZEB2 PATZ1 ZNF629 ZNF561 ZBTB20 ENSG00000254839 LOC101929269 ENSG00000255310 ENSG00000269954 ENSG00000254936 ENSG00000269918 MIR598 XKR6
GH08J011071 Enhancer 0.7 Ensembl 0.4 -5.1 -5107 0.8 SP7 KLF14 GLIS2 PRDM10 ZIC2 PATZ1 PKNOX1 ZNF341 KLF9 SP2 ENSG00000269918 MIR598 LINC00529 FAM167A LOC101929269 XKR6
GH08J011092 Enhancer 0.8 Ensembl 0.3 -25.5 -25482 0.4 MAFK TFE3 PRDM1 KAT8 HMG20B BACH1 REST NFKBIZ RXRB IRF2 ENSG00000254839 XKR6 ENSG00000254936 ENSG00000269918 LOC101929269
GH08J011081 Enhancer 0.4 Ensembl 0.4 -14.4 -14411 0.7 RCOR1 ZNF664 ENSG00000269918 ENSG00000255310 ENSG00000254936 XKR6 NEIL2 LOC101929269
GH08J011083 Enhancer 0.4 Ensembl 0.4 -16.5 -16482 0.4 POLR2A SIN3A ENSG00000255310 XKR6 LOC101929269 ENSG00000269918
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929269 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929269 Gene

Genomic Locations for LOC101929269 Gene
chr8:11,062,652-11,067,119
(GRCh38/hg38)
Size:
4,468 bases
Orientation:
Minus strand
chr8:10,920,157-10,924,599
(GRCh37/hg19)
Size:
4,443 bases
Orientation:
Minus strand

Genomic View for LOC101929269 Gene

Genes around LOC101929269 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929269 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929269 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929269 Gene

Proteins for LOC101929269 Gene

Post-translational modifications for LOC101929269 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929269 Gene

Domains & Families for LOC101929269 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929269 Gene

Function for LOC101929269 Gene

Phenotypes From GWAS Catalog for LOC101929269 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929269 Gene

Localization for LOC101929269 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929269 Gene

Pathways & Interactions for LOC101929269 Gene

PathCards logo

SuperPathways for LOC101929269 Gene

No Data Available

Interacting Proteins for LOC101929269 Gene

Gene Ontology (GO) - Biological Process for LOC101929269 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929269 Gene

Drugs & Compounds for LOC101929269 Gene

No Compound Related Data Available

Transcripts for LOC101929269 Gene

mRNA/cDNA for LOC101929269 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929269 Gene

No ASD Table

Relevant External Links for LOC101929269 Gene

GeneLoc Exon Structure for
LOC101929269

Expression for LOC101929269 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929269 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929269 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.2), Brain - Cerebellum (x6.4), Pituitary (x5.8), and Brain - Hypothalamus (x4.4).
genes like me logo Genes that share expression patterns with LOC101929269: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929269 Gene

Orthologs for LOC101929269 Gene

No data available for Orthologs and Evolution for LOC101929269 Gene

Paralogs for LOC101929269 Gene

No data available for Paralogs for LOC101929269 Gene

Variants for LOC101929269 Gene

Sequence variations from dbSNP and Humsavar for LOC101929269 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000109673 -- 11,062,987(-) G/A non_coding_transcript_variant
rs1000293909 -- 11,065,715(-) A/G/T intron_variant
rs1000842303 -- 11,066,680(-) A/G intron_variant
rs1001276319 -- 11,066,933(-) A/G non_coding_transcript_variant
rs1001403924 -- 11,069,019(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929269 Gene

Disorders for LOC101929269 Gene

No disorders were found for LOC101929269 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929269 Gene

Publications for LOC101929269 Gene

No publications were found for LOC101929269 Gene.

No data available for External Links for LOC101929269 Gene

Products for LOC101929269 Gene

Sources for LOC101929269 Gene

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