Aliases for LOC101929259 Gene

Subcategory (RNA class) for LOC101929259 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC101929259 Gene

  • Uncharacterized LOC101929259 3
  • HSALNG0096794 167
  • Lnc-GTF2F2-13 168

External Ids for LOC101929259 Gene

Previous GeneCards Identifiers for LOC101929259 Gene

  • GC13U901020

Summaries for LOC101929259 Gene

GeneCards Summary for LOC101929259 Gene

LOC101929259 (Uncharacterized LOC101929259) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929259 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929259 Gene

Genomics for LOC101929259 Gene

GeneHancer (GH) Regulatory Elements for LOC101929259 Gene

Promoters and enhancers for LOC101929259 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J045105 Enhancer 0.4 ENCODE 500.7 -0.1 -148 1.1 FOS CEBPB ZNF121 LOC101929259 FJ601666-022
GH13J045100 Enhancer 0.7 Ensembl ENCODE CraniofacialAtlas 0.7 -3.9 -3914 2.9 MEIS2 PKNOX1 ZSCAN4 LOC101929259 FJ601666-022
GH13J045108 Enhancer 0.6 ENCODE 0.7 +2.6 2642 0.2 NRF1 TFDP1 PBX2 GABPB1 GABPA GATAD1 MEIS2 ZBTB33 E2F4 POLR2A LOC101929259 GTF2F2
GH13J045113 Enhancer 0.4 Ensembl 0.4 +7.6 7622 0.6 EP300 POLR2A SMARCA4 GTF2F2 LOC101929259
GH13J045092 Enhancer 0.4 Ensembl 0.4 -13.4 -13415 0.5 JUND FOS POLR2A FJ601666-022 LOC101929259
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929259 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929259 Gene

Genomic Locations for LOC101929259 Gene
chr13:45,106,279-45,113,206
(GRCh38/hg38)
Size:
6,928 bases
Orientation:
Plus strand

Genomic View for LOC101929259 Gene

Genes around LOC101929259 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929259 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929259 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929259 Gene

Proteins for LOC101929259 Gene

Post-translational modifications for LOC101929259 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929259 Gene

Domains & Families for LOC101929259 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929259 Gene

Function for LOC101929259 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929259 Gene

Localization for LOC101929259 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929259 Gene

Pathways & Interactions for LOC101929259 Gene

PathCards logo

SuperPathways for LOC101929259 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101929259 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929259 Gene

Drugs & Compounds for LOC101929259 Gene

No Compound Related Data Available

Transcripts for LOC101929259 Gene

mRNA/cDNA for LOC101929259 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929259 Gene

No ASD Table

Relevant External Links for LOC101929259 Gene

GeneLoc Exon Structure for
LOC101929259

Expression for LOC101929259 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929259 Gene

Orthologs for LOC101929259 Gene

No data available for Orthologs and Evolution for LOC101929259 Gene

Paralogs for LOC101929259 Gene

No data available for Paralogs for LOC101929259 Gene

Variants for LOC101929259 Gene

Additional dbSNP identifiers (rs#s) for LOC101929259 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929259 Gene

Variant ID Type Subtype PubMed ID
nsv832596 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929259 Gene

Disorders for LOC101929259 Gene

No disorders were found for LOC101929259 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929259 Gene

Publications for LOC101929259 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC101929259 Gene

Products for LOC101929259 Gene

Sources for LOC101929259 Gene