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Aliases for LOC101929258 Gene

Subcategory (RNA class) for LOC101929258 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929258 Gene

  • Uncharacterized LOC101929258 3

External Ids for LOC101929258 Gene

Previous GeneCards Identifiers for LOC101929258 Gene

  • GC08U901765

Summaries for LOC101929258 Gene

GeneCards Summary for LOC101929258 Gene

LOC101929258 (Uncharacterized LOC101929258) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929258 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929258 Gene

Genomics for LOC101929258 Gene

GeneHancer (GH) Regulatory Elements for LOC101929258 Gene

Promoters and enhancers for LOC101929258 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J023708 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 0.4 +19.8 19833 0.9 SP1 EZH2 USF1 USF2 ENSG00000253471 NKX2-6 ADAM28 LOC101929258
GH08J023731 Enhancer 0.7 ENCODE dbSUPER 0.7 -4.5 -4525 0.2 MAFK SP1 FOS FOSL2 LOC101929258 ENSG00000254002 ENSG00000253471
GH08J023720 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +5.4 5387 8.8 MAFK CEBPB JUN SP1 EZH2 RCOR1 JUND FOS PRDM4 FOSL2 ENSG00000254002 LOC101929258 ENSG00000253471
GH08J023714 Enhancer 0.8 dbSUPER 0.4 +12.0 12003 2 ZNF473 ZNF121 SP7 GLIS2 ZNF600 ZIC2 ZSCAN4 ZEB2 POLR2A ZNF629 ENSG00000254002 ENSG00000253471 LOC101929258
GH08J023729 Enhancer 0.2 dbSUPER 0.7 -2.6 -2554 0.8 LOC101929258 ENSG00000254002 ENSG00000253471
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929258 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929258 Gene

Genomic Locations for LOC101929258 Gene
chr8:23,711,902-23,726,988
(GRCh38/hg38)
Size:
15,087 bases
Orientation:
Minus strand

Genomic View for LOC101929258 Gene

Genes around LOC101929258 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929258 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929258 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929258 Gene

Proteins for LOC101929258 Gene

Post-translational modifications for LOC101929258 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929258 Gene

Domains & Families for LOC101929258 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929258 Gene

Function for LOC101929258 Gene

Phenotypes From GWAS Catalog for LOC101929258 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929258 Gene

Localization for LOC101929258 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929258 Gene

Pathways & Interactions for LOC101929258 Gene

PathCards logo

SuperPathways for LOC101929258 Gene

No Data Available

Interacting Proteins for LOC101929258 Gene

Gene Ontology (GO) - Biological Process for LOC101929258 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929258 Gene

Drugs & Compounds for LOC101929258 Gene

No Compound Related Data Available

Transcripts for LOC101929258 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929258 Gene

No ASD Table

Relevant External Links for LOC101929258 Gene

GeneLoc Exon Structure for
LOC101929258

No data available for mRNA/cDNA for LOC101929258 Gene

Expression for LOC101929258 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929258 Gene

Orthologs for LOC101929258 Gene

No data available for Orthologs and Evolution for LOC101929258 Gene

Paralogs for LOC101929258 Gene

No data available for Paralogs for LOC101929258 Gene

Variants for LOC101929258 Gene

Sequence variations from dbSNP and Humsavar for LOC101929258 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000288730 -- 23,728,797(-) A/G upstream_transcript_variant
rs1000401183 -- 23,727,854(-) A/T upstream_transcript_variant
rs1000453679 -- 23,727,673(-) C/T upstream_transcript_variant
rs1001023561 -- 23,727,291(-) G/C upstream_transcript_variant
rs1001070673 -- 23,716,613(-) A/G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929258 Gene

Disorders for LOC101929258 Gene

No disorders were found for LOC101929258 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929258 Gene

Publications for LOC101929258 Gene

  1. Beyond single-marker analyses: mining whole genome scans for insights into treatment responses in severe sepsis. (PMID: 22310353) Man M … Garcia JG (The pharmacogenomics journal 2013) 3 58

No data available for External Links for LOC101929258 Gene

Products for LOC101929258 Gene

Sources for LOC101929258 Gene

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