Aliases for LOC101929208 Gene

Subcategory (RNA class) for LOC101929208 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for LOC101929208 Gene

  • Uncharacterized LOC101929208 3
  • HSALNG0087719 169
  • NONHSAG009860 94
  • Lnc-TRIM29-8 170

External Ids for LOC101929208 Gene

Previous GeneCards Identifiers for LOC101929208 Gene

  • GC11U902020

Summaries for LOC101929208 Gene

GeneCards Summary for LOC101929208 Gene

LOC101929208 (Uncharacterized LOC101929208) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929208 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929208 Gene

Genomics for LOC101929208 Gene

GeneHancer (GH) Regulatory Elements for LOC101929208 Gene

Promoters and enhancers for LOC101929208 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J120956 Enhancer 0.5 Ensembl ENCODE 750.6 +0.7 723 1.8 SP1 ETS1 LOC101929208 TECTA HMGB1P42 lnc-TRIM29-6 GRIK4
GH11J120952 Enhancer 0.7 ENCODE 0.4 +5.0 5006 1.5 CTCF ELF1 DACH1 RAD21 ZNF148 ELF3 MLLT1 IKZF1 ZNF740 TRIM22 LOC101929208 lnc-TRIM29-6 HMGB1P42 GRIK4
GH11J120938 Enhancer 0.3 Ensembl 0.4 +19.7 19722 1 ATF7 ATF2 HMGB1P42 lnc-TRIM29-6 LOC101929208 GRIK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929208 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929208 Gene

Genomic Locations for LOC101929208 Gene
chr11:120,940,464-120,958,223
(GRCh38/hg38)
Size:
17,760 bases
Orientation:
Minus strand

Genomic View for LOC101929208 Gene

Genes around LOC101929208 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929208 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929208 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929208 Gene

Proteins for LOC101929208 Gene

Post-translational modifications for LOC101929208 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929208 Gene

Domains & Families for LOC101929208 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929208 Gene

Function for LOC101929208 Gene

Phenotypes From GWAS Catalog for LOC101929208 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929208 Gene

Localization for LOC101929208 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929208 Gene

Pathways & Interactions for LOC101929208 Gene

PathCards logo

SuperPathways for LOC101929208 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929208 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929208 Gene

Drugs & Compounds for LOC101929208 Gene

No Compound Related Data Available

Transcripts for LOC101929208 Gene

mRNA/cDNA for LOC101929208 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(5) RNACentral transcripts :
(2) NONCODE transcripts :
(3) LNCipedia transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929208 Gene

No ASD Table

Relevant External Links for LOC101929208 Gene

GeneLoc Exon Structure for
LOC101929208

Expression for LOC101929208 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929208 Gene

Orthologs for LOC101929208 Gene

No data available for Orthologs and Evolution for LOC101929208 Gene

Paralogs for LOC101929208 Gene

No data available for Paralogs for LOC101929208 Gene

Variants for LOC101929208 Gene

Sequence variations from dbSNP and Humsavar for LOC101929208 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs534517447 likely-pathogenic, not provided 120,956,935(-) G/A intron_variant
rs1000396201 -- 120,950,933(-) A/G intron_variant
rs1000408389 -- 120,959,215(-) A/G upstream_transcript_variant
rs1000454361 -- 120,947,047(-) C/T intron_variant
rs1000850506 -- 120,954,180(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929208 Gene

Disorders for LOC101929208 Gene

No disorders were found for LOC101929208 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929208 Gene

Publications for LOC101929208 Gene

No publications were found for LOC101929208 Gene.

No data available for External Links for LOC101929208 Gene

Products for LOC101929208 Gene

Sources for LOC101929208 Gene