Aliases for LOC101929185 Gene

Subcategory (RNA class) for LOC101929185 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929185 Gene

  • Uncharacterized LOC101929185 3

External Ids for LOC101929185 Gene

Previous GeneCards Identifiers for LOC101929185 Gene

  • GC17U901892

Summaries for LOC101929185 Gene

GeneCards Summary for LOC101929185 Gene

LOC101929185 (Uncharacterized LOC101929185) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929185 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929185 Gene

Genomics for LOC101929185 Gene

GeneHancer (GH) Regulatory Elements for LOC101929185 Gene

Promoters and enhancers for LOC101929185 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J057982 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -1.4 -1353 9.1 PPP1R10 ZNF785 SIN3A GATA3 RBPJ POLR2A NR2F6 ATF1 ZNF217 CREB1 VEZF1 ENSG00000280233 LOC101929185 MKS1 SRSF1 TEX14 ENSG00000264914 OR4D1 LOC101927557 SETP3
GH17J057978 Enhancer 0.4 Ensembl dbSUPER 0.4 -8.5 -8509 0.4 OSR2 5MWI_A-084 CUEDC1 SRSF1 LOC101927666 VEZF1 LOC101929185
GH17J057979 Enhancer 0.3 dbSUPER 0.4 -7.5 -7487 1.4 SMARCA5 5MWI_A-084 CUEDC1 SRSF1 LOC101927666 VEZF1 LOC101929185
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929185 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929185 Gene

Genomic Locations for LOC101929185 Gene
chr17:57,988,110-57,989,295
(GRCh38/hg38)
Size:
1,186 bases
Orientation:
Plus strand

Genomic View for LOC101929185 Gene

Genes around LOC101929185 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929185 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929185 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929185 Gene

Proteins for LOC101929185 Gene

Post-translational modifications for LOC101929185 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929185 Gene

Domains & Families for LOC101929185 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929185 Gene

Function for LOC101929185 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929185 Gene

Localization for LOC101929185 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929185 Gene

Pathways & Interactions for LOC101929185 Gene

PathCards logo

SuperPathways for LOC101929185 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929185 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929185 Gene

Drugs & Compounds for LOC101929185 Gene

No Compound Related Data Available

Transcripts for LOC101929185 Gene

mRNA/cDNA for LOC101929185 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929185 Gene

No ASD Table

Relevant External Links for LOC101929185 Gene

GeneLoc Exon Structure for
LOC101929185

Expression for LOC101929185 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929185 Gene

Orthologs for LOC101929185 Gene

No data available for Orthologs and Evolution for LOC101929185 Gene

Paralogs for LOC101929185 Gene

No data available for Paralogs for LOC101929185 Gene

Variants for LOC101929185 Gene

Sequence variations from dbSNP and Humsavar for LOC101929185 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000074295 -- 57,987,831(+) GTGTGTGTG/GTG/GTGTGTG upstream_transcript_variant
rs1000191054 -- 57,994,134(+) A/G non_coding_transcript_variant
rs1000255549 -- 57,990,028(+) T/C non_coding_transcript_variant
rs1000286552 -- 57,990,465(+) C/A non_coding_transcript_variant
rs1000313370 -- 57,993,579(+) G/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929185 Gene

Disorders for LOC101929185 Gene

No disorders were found for LOC101929185 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929185 Gene

Publications for LOC101929185 Gene

  1. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PMID: 21697133) Oshikawa M … Kato S (Investigative ophthalmology & visual science 2011) 3 56

No data available for External Links for LOC101929185 Gene

Products for LOC101929185 Gene

Sources for LOC101929185 Gene