Aliases for LOC101929141 Gene

Aliases for LOC101929141 Gene

  • Coiled-Coil Domain-Containing Protein 144B-Like 3 5
  • AC107982.1 5

External Ids for LOC101929141 Gene

Previous GeneCards Identifiers for LOC101929141 Gene

  • GC17U901874
  • GC17P018836

Summaries for LOC101929141 Gene

GeneCards Summary for LOC101929141 Gene

LOC101929141 (Coiled-Coil Domain-Containing Protein 144B-Like) is a Protein Coding gene.

Additional gene information for LOC101929141 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929141 Gene

Genomics for LOC101929141 Gene

GeneHancer (GH) Regulatory Elements for LOC101929141 Gene

Promoters and enhancers for LOC101929141 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J018855 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +23.1 23065 7.1 ZNF785 SP1 MLX POLR2A CTBP1 USF2 ATF1 FOS CREB1 JUND PRPSAP2 lnc-FAM83G-5 hsa-miR-5095-215 TVP23B MAPK7 SMCR8 FOXO3B FLII RPS2P46 ENSG00000262202
GH17J018849 Enhancer 0.9 Ensembl ENCODE 0.4 +15.3 15339 2.8 MAFK BACH1 SP7 CREM IKZF1 CREB1 ZBTB8A IKZF2 ZNF629 PKNOX1 PRPSAP2 RF00017-2307 RN7SL627P lnc-FAM83G-5 lnc-TBC1D28-3-002 LOC101929141
GH17J018816 Enhancer 0.6 ENCODE 0.4 -17.7 -17715 0.1 CTCF RAD21 TRIM22 ATF1 ZNF740 HDAC1 SMC3 ZNF592 MEF2D IKZF1 lnc-ZNF286B-2 LOC101929141
GH17J018843 Enhancer 0.3 Ensembl 0.4 +8.9 8939 0.8 REST FOXO3B RF00017-2307 RN7SL627P PRPSAP2 lnc-TBC1D28-3-002 LOC101929141 lnc-FAM83G-5
GH17J018821 Enhancer 0.3 Ensembl 0.4 -13.2 -13161 0.6 RAD51 LOC101929141 lnc-ZNF286B-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929141 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929141 Gene

Genomic Locations for LOC101929141 Gene
chr17:18,834,662-18,865,564
(GRCh38/hg38)
Size:
30,903 bases
Orientation:
Plus strand

Genomic View for LOC101929141 Gene

Genes around LOC101929141 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929141 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929141 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929141 Gene

Proteins for LOC101929141 Gene

Post-translational modifications for LOC101929141 Gene

No Post-translational modifications

Other Protein References for LOC101929141 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC101929141 Gene

Domains & Families for LOC101929141 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929141 Gene

Function for LOC101929141 Gene

Phenotypes From GWAS Catalog for LOC101929141 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929141 Gene

Localization for LOC101929141 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929141 Gene

Pathways & Interactions for LOC101929141 Gene

PathCards logo

SuperPathways for LOC101929141 Gene

No Data Available

Interacting Proteins for LOC101929141 Gene

Gene Ontology (GO) - Biological Process for LOC101929141 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929141 Gene

Drugs & Compounds for LOC101929141 Gene

No Compound Related Data Available

Transcripts for LOC101929141 Gene

mRNA/cDNA for LOC101929141 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929141 Gene

No ASD Table

Relevant External Links for LOC101929141 Gene

GeneLoc Exon Structure for
LOC101929141

Expression for LOC101929141 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929141 Gene

Orthologs for LOC101929141 Gene

Evolution for LOC101929141 Gene

ENSEMBL:
Gene Tree for LOC101929141 (if available)
TreeFam:
Gene Tree for LOC101929141 (if available)

No data available for Orthologs for LOC101929141 Gene

Paralogs for LOC101929141 Gene

No data available for Paralogs for LOC101929141 Gene

Variants for LOC101929141 Gene

Sequence variations from dbSNP and Humsavar for LOC101929141 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000096826 -- 18,833,750(+) A/C upstream_transcript_variant
rs1005637143 -- 18,838,970(+) A/T intron_variant
rs1005669768 -- 18,840,824(+) C/G intron_variant
rs1006893102 -- 18,837,060(+) A/G/T intron_variant
rs1007271470 -- 18,834,107(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929141 Gene

Disorders for LOC101929141 Gene

No disorders were found for LOC101929141 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929141 Gene

Publications for LOC101929141 Gene

  1. Genome-wide association study of pancreatic cancer in Japanese population. (PMID: 20686608) Low SK … Sakamoto H (PloS one 2010) 3 56

No data available for External Links for LOC101929141 Gene

Products for LOC101929141 Gene

Sources for LOC101929141 Gene