Aliases for LOC101929124 Gene

Subcategory (RNA class) for LOC101929124 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC101929124 Gene

  • Uncharacterized LOC101929124 3
  • Novel Transcript 5
  • NONHSAG025311 92
  • CTC-457E21.1 3
  • Lnc-ZNF99-2 168
  • AC011467.1 5

External Ids for LOC101929124 Gene

Previous GeneCards Identifiers for LOC101929124 Gene

  • GC19U901764
  • GC19M022704

Summaries for LOC101929124 Gene

GeneCards Summary for LOC101929124 Gene

LOC101929124 (Uncharacterized LOC101929124) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929124 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929124 Gene

Genomics for LOC101929124 Gene

GeneHancer (GH) Regulatory Elements for LOC101929124 Gene

Promoters and enhancers for LOC101929124 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J022526 Promoter/Enhancer 0.5 Ensembl ENCODE 500.7 +0.5 510 2.2 LOC101929124 LINC01233 ENSG00000270317 piR-38580-143 ZNF98 LOC105376917 lnc-ZNF492-2 NONHSAG045689.2-002
GH19J022528 Enhancer 0.2 ENCODE 505.1 -1.9 -1878 2.5 LOC101929124 LINC01233 ZNF98 LOC105376917 lnc-ZNF492-2 NONHSAG045689.2-002
GH19J022525 Enhancer 0.2 ENCODE 500.7 +1.9 1875 0.2 LOC101929124 piR-38580-143 ZNF98 LOC105376917 lnc-ZNF492-2 NONHSAG045689.2-002
GH19J022531 Promoter/Enhancer 0.6 Ensembl ENCODE 0.7 -4.5 -4452 2 SP2 LINC01233 LOC105376917 ZNF98 ENSG00000270317 LOC101929124 lnc-ZNF492-2 NONHSAG045689.2-002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929124 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929124 Gene

Genomic Locations for LOC101929124 Gene
chr19:22,520,995-22,527,949
(GRCh38/hg38)
Size:
6,955 bases
Orientation:
Minus strand
chr19:22,703,797-22,710,751
(GRCh37/hg19)
Size:
6,955 bases
Orientation:
Minus strand

Genomic View for LOC101929124 Gene

Genes around LOC101929124 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929124 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929124 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929124 Gene

Proteins for LOC101929124 Gene

Post-translational modifications for LOC101929124 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929124 Gene

Domains & Families for LOC101929124 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929124 Gene

Function for LOC101929124 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929124 Gene

Localization for LOC101929124 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929124 Gene

Pathways & Interactions for LOC101929124 Gene

PathCards logo

SuperPathways for LOC101929124 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101929124 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929124 Gene

Drugs & Compounds for LOC101929124 Gene

No Compound Related Data Available

Transcripts for LOC101929124 Gene

mRNA/cDNA for LOC101929124 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929124 Gene

No ASD Table

Relevant External Links for LOC101929124 Gene

GeneLoc Exon Structure for
LOC101929124

Expression for LOC101929124 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929124 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929124 Gene

This gene is overexpressed in Ovary (x10.2), Testis (x8.2), and Pancreas (x6.4).
genes like me logo Genes that share expression patterns with LOC101929124: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929124 Gene

Orthologs for LOC101929124 Gene

Evolution for LOC101929124 Gene

ENSEMBL:
Gene Tree for LOC101929124 (if available)
TreeFam:
Gene Tree for LOC101929124 (if available)

No data available for Orthologs for LOC101929124 Gene

Paralogs for LOC101929124 Gene

No data available for Paralogs for LOC101929124 Gene

Variants for LOC101929124 Gene

Additional dbSNP identifiers (rs#s) for LOC101929124 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101929124 Gene

Variant ID Type Subtype PubMed ID
dgv140n111 CNV duplication 26073780
dgv3n43 CNV gain 19587683
dgv511e201 CNV deletion 23290073
dgv512e201 CNV deletion 23290073
dgv633e199 CNV deletion 23128226
esv2751784 CNV gain 17911159
esv2758750 CNV gain+loss 17122850
esv34340 CNV loss 17911159
esv3893182 CNV gain 25118596
esv4924 OTHER complex 18987735
nsv1078307 OTHER inversion 25765185
nsv1120056 OTHER inversion 24896259
nsv436853 CNV insertion 17901297
nsv525240 CNV gain 19592680
nsv833787 CNV gain 17160897
nsv953254 CNV deletion 24416366
nsv960813 CNV duplication 23825009
nsv9681 CNV loss 18304495

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929124 Gene

Disorders for LOC101929124 Gene

No disorders were found for LOC101929124 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929124 Gene

Publications for LOC101929124 Gene

No publications were found for LOC101929124 Gene.

No data available for Mastermind for LOC101929124 Gene

Products for LOC101929124 Gene

Sources for LOC101929124 Gene