Aliases for LOC101929116 Gene

Data sources for LOC101929116 Gene:

Subcategory (RNA class) for LOC101929116 Gene


Aliases for LOC101929116 Gene

External Ids for LOC101929116 Gene

Previous GeneCards Identifiers for LOC101929116 Gene

  • GC09U901879

Summaries for LOC101929116 Gene

GeneCards Summary for LOC101929116 Gene

LOC101929116 (Uncharacterized LOC101929116) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101929116 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929116 Gene

Genomics for LOC101929116 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929116 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J126275 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 250.7 +0.3 318 1.6 ZNF48 GATA2 EGR2 CHD2 POLR2A ZFHX2 LOC101929116 lnc-MVB12B-6 RF00017-7911 MVB12B PBX3
GH09J126297 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -22.6 -22648 1.3 POLR2A ENSG00000228392 MVB12B LOC101929116 RF00017-7911 PBX3
GH09J126295 Enhancer 0.4 Ensembl dbSUPER 0.3 -20.3 -20343 0.7 ZIC2 ENSG00000228392 LOC101929116 MVB12B RF00017-7911 PBX3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929116 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929116 Gene

Latest Assembly
6,659 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
5,792 bases
Minus strand

Genomic View for LOC101929116 Gene

Genes around LOC101929116 on UCSC Golden Path with GeneCards custom track
LOC101929116 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101929116 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929116 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929116 Gene

Proteins for LOC101929116 Gene

Post-translational modifications for LOC101929116 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929116 Gene

Domains & Families for LOC101929116 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929116 Gene

Function for LOC101929116 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929116 Gene

Localization for LOC101929116 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929116 Gene

Pathways & Interactions for LOC101929116 Gene

PathCards logo

SuperPathways for LOC101929116 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929116 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929116 Gene

Drugs & Compounds for LOC101929116 Gene

No Compound Related Data Available

Transcripts for LOC101929116 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101929116 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000060CDFF_9606 lncRNA 2102 3

Ensembl: ENST00000419853 (view in UCSC) ,

LNCipedia: lnc-MAPKAP1-2:1,


URS000075C17E_9606 lncRNA 2099 2

RefSeq: NR_121584,

LNCipedia: lnc-MAPKAP1-2:2,

URS00009AF9A1_9606 lncRNA 2102 2

LncBook: HSALNT0155422,


URS0001BDA66A_9606 lncRNA 3476 1

LncBook: HSALNT0155421,

URS0001BEE242_9606 lncRNA 2890 1

LncBook: HSALNT0155420,

LOC101929116 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101929116 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929116 Gene

No ASD Table

Relevant External Links for LOC101929116 Gene

GeneLoc Exon Structure for

Expression for LOC101929116 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929116 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101929116

genes like me logo Genes that share expression patterns with LOC101929116: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929116 Gene

Orthologs for LOC101929116 Gene

Evolution for LOC101929116 Gene

Gene Tree for LOC101929116 (if available)
Gene Tree for LOC101929116 (if available)

No data available for Orthologs for LOC101929116 Gene

Paralogs for LOC101929116 Gene

No data available for Paralogs for LOC101929116 Gene

Variants for LOC101929116 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101929116 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC101929116 Gene

Variant ID Type Subtype PubMed ID
esv2759715 CNV gain 17122850
nsv1037888 CNV loss 25217958

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101929116 Gene

Disorders for LOC101929116 Gene

No disorders were found for LOC101929116 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929116 Gene

Publications for LOC101929116 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC101929116 Gene

Products for LOC101929116 Gene

Sources for LOC101929116 Gene